Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023972.1-P | Field mustard | nucleus | 99.61 | 99.61 |
| CDX72337 | Canola | nucleus | 96.53 | 95.6 |
| CDX68803 | Canola | nucleus | 75.48 | 76.52 |
| AT4G31920.1 | Thale cress | nucleus | 75.29 | 70.65 |
| CDX87845 | Canola | cytosol, extracellular | 16.99 | 65.67 |
| CDY52720 | Canola | nucleus | 21.24 | 58.82 |
| CDY70103 | Canola | nucleus | 65.44 | 58.75 |
| CDY35371 | Canola | nucleus | 65.44 | 58.35 |
| CDY54632 | Canola | cytosol | 16.02 | 56.08 |
| CDX82391 | Canola | cytosol | 15.83 | 55.41 |
| CDY54630 | Canola | cytosol | 16.02 | 53.55 |
| CDX73905 | Canola | nucleus | 7.72 | 40.0 |
| CDY49965 | Canola | mitochondrion | 25.87 | 39.76 |
| CDY64566 | Canola | nucleus | 26.45 | 36.44 |
| CDY09419 | Canola | nucleus | 26.25 | 36.07 |
| Solyc07g005140.2.1 | Tomato | nucleus | 43.63 | 33.98 |
| PGSC0003DMT400020233 | Potato | nucleus | 46.33 | 33.95 |
| Solyc12g010330.1.1 | Tomato | nucleus | 46.33 | 33.9 |
| CDY56439 | Canola | nucleus | 17.57 | 33.09 |
| CDX86245 | Canola | nucleus | 17.37 | 32.97 |
| CDX75892 | Canola | nucleus | 28.76 | 32.96 |
| Os02t0182100-01 | Rice | nucleus | 39.0 | 32.27 |
| Zm00001d015521_P001 | Maize | nucleus | 38.61 | 31.7 |
| EES06387 | Sorghum | nucleus | 38.42 | 31.54 |
| CDX95898 | Canola | nucleus | 30.7 | 31.49 |
| GSMUA_Achr3P13400_001 | Banana | nucleus | 37.84 | 31.21 |
| CDY68249 | Canola | nucleus | 26.25 | 31.12 |
| CDX92102 | Canola | nucleus | 29.92 | 30.88 |
| TraesCS6B01G174400.1 | Wheat | nucleus | 36.87 | 30.71 |
| HORVU6Hr1G028680.1 | Barley | nucleus | 36.68 | 30.5 |
| CDX73907 | Canola | nucleus | 7.92 | 30.37 |
| TraesCS6A01G146200.3 | Wheat | nucleus | 36.68 | 29.69 |
| TraesCS6D01G135500.3 | Wheat | nucleus | 36.68 | 29.46 |
| CDY02794 | Canola | nucleus | 27.03 | 29.35 |
| PGSC0003DMT400008290 | Potato | nucleus | 43.24 | 28.98 |
| CDX90546 | Canola | nucleus | 32.63 | 28.64 |
| CDY28869 | Canola | nucleus | 27.99 | 28.6 |
| CDY07410 | Canola | nucleus | 27.8 | 28.29 |
| CDY01838 | Canola | nucleus | 27.22 | 28.2 |
| CDX96070 | Canola | nucleus | 27.8 | 28.07 |
| CDY09718 | Canola | nucleus | 32.24 | 27.79 |
| CDX82389 | Canola | nucleus | 31.85 | 27.09 |
| CDY32725 | Canola | nucleus | 29.73 | 24.72 |
| CDY02793 | Canola | nucleus | 29.73 | 24.6 |
| CDY33920 | Canola | nucleus | 19.88 | 23.79 |
| CDY05641 | Canola | nucleus | 20.27 | 23.54 |
| CDY08579 | Canola | nucleus | 10.42 | 22.31 |
| CDY11437 | Canola | nucleus | 17.76 | 21.9 |
| CDX76652 | Canola | nucleus | 17.57 | 21.72 |
| CDY16482 | Canola | nucleus | 18.34 | 21.59 |
| CDX77263 | Canola | nucleus | 18.34 | 21.11 |
| CDX80940 | Canola | nucleus | 9.85 | 20.9 |
| CDY00969 | Canola | nucleus | 11.2 | 20.42 |
| CDY52133 | Canola | nucleus | 9.85 | 20.4 |
| CDY29358 | Canola | nucleus | 19.88 | 20.4 |
| CDX98816 | Canola | nucleus | 10.23 | 20.31 |
| CDX79963 | Canola | nucleus | 9.65 | 20.24 |
| CDY53674 | Canola | nucleus | 9.65 | 20.16 |
| CDY04335 | Canola | nucleus | 19.88 | 19.51 |
| CDY61256 | Canola | nucleus | 9.85 | 18.61 |
| CDY67763 | Canola | nucleus | 21.24 | 18.52 |
| CDX70016 | Canola | nucleus | 21.43 | 18.5 |
| CDX98997 | Canola | nucleus | 21.24 | 18.36 |
| CDX99104 | Canola | nucleus | 10.23 | 18.28 |
| CDX68392 | Canola | nucleus | 9.07 | 17.94 |
| CDX82988 | Canola | nucleus | 8.88 | 17.76 |
| CDY34423 | Canola | nucleus | 16.02 | 17.47 |
| CDY32209 | Canola | nucleus | 15.64 | 17.16 |
| CDY36273 | Canola | mitochondrion | 7.92 | 17.15 |
| CDX81041 | Canola | nucleus | 18.73 | 17.14 |
| CDX78284 | Canola | nucleus | 18.34 | 16.73 |
| CDY14053 | Canola | nucleus | 20.27 | 14.04 |
| CDX86925 | Canola | nucleus | 16.22 | 12.41 |
| CDY30695 | Canola | nucleus | 14.29 | 9.83 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078FG87 | UniProt:A0A078FG87 |
| EnsemblPlants:CDY13465 | ProteinID:CDY13465 | ProteinID:CDY13465.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00077765001 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00072 |
| PFAM:PF00249 | PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF7 |
| InterPro:Response_reg_B-typ_pln | InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver |
| TIGRFAMs:TIGR01557 | UniParc:UPI0004EEAE9E | SEG:seg | : | : | : |
Description
BnaA03g51830DTwo-component response regulator [Source:UniProtKB/TrEMBL;Acc:A0A078FG87]
Coordinates
chrLK032035:-:500179..502901
Molecular Weight (calculated)
57917.8 Da
IEP (calculated)
6.346
GRAVY (calculated)
-0.558
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVEQDFEAV DQFPVGMRVL AVDDDQTCLR ILETLLHRCQ YHVTTTDSAQ TALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVKH GACDYLLKPV RIEELKNIWQ HVVRKSKFKK MKSIVINDDH SQGNSDQNGV KANRKRKDQF EEVEEEDEER GNENDDPTAQ KKPRVLWTRE
201: LHNKFLAAVD HLGVEKAQPK KILELMNVDK LTRENVASHL QKFRSALKKI TNEANQQANM AAIDSHFMQM SALKGLGGFH NQRQIPLGSG QFHGGAATMR
301: HYPLGRLNSF GGVFPHVSSS LPRNHNDGGY VLQGMPIPPL DDLNNKAFPS FTSQQSSLMV APNNQLVLQG HQQSSYPSLN PGLSPHFEIN KRLDDWSNAL
401: LSTNIPQSGV HSKPDALEWN HFCNSDAAQA GFIDPLQMKQ QPANNLGPMT DAQLLRSSNP IEGLFVGQQK LENGSMPSNA GSLDDIVNSM TPKEQSQAEL
501: FEGDLGFGWH NSSLRTCI
101: PKYVMKGVKH GACDYLLKPV RIEELKNIWQ HVVRKSKFKK MKSIVINDDH SQGNSDQNGV KANRKRKDQF EEVEEEDEER GNENDDPTAQ KKPRVLWTRE
201: LHNKFLAAVD HLGVEKAQPK KILELMNVDK LTRENVASHL QKFRSALKKI TNEANQQANM AAIDSHFMQM SALKGLGGFH NQRQIPLGSG QFHGGAATMR
301: HYPLGRLNSF GGVFPHVSSS LPRNHNDGGY VLQGMPIPPL DDLNNKAFPS FTSQQSSLMV APNNQLVLQG HQQSSYPSLN PGLSPHFEIN KRLDDWSNAL
401: LSTNIPQSGV HSKPDALEWN HFCNSDAAQA GFIDPLQMKQ QPANNLGPMT DAQLLRSSNP IEGLFVGQQK LENGSMPSNA GSLDDIVNSM TPKEQSQAEL
501: FEGDLGFGWH NSSLRTCI
001: MTMEQEIEVL DQFPVGMRVL AVDDDQTCLR ILQTLLQRCQ YHVTTTNQAQ TALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVKH GACDYLLKPV RIEELKNIWQ HVVRKSKLKK NKSNVSNGSG NCDKANRKRK EQYEEEEEEE RGNDNDDPTA QKKPRVLWTH ELHNKFLAAV
201: DHLGVERAVP KKILDLMNVD KLTRENVASH LQKFRVALKK VSDDAIQQAN RAAIDSHFMQ MNSQKGLGGF YHHHRGIPVG SGQFHGGTTM MRHYSSNRNL
301: GRLNSLGAGM FQPVSSSFPR NHNDGGNILQ GLPLEELQIN NNINRAFPSF TSQQNSPMVA PSNLLLLEGN PQSSSLPSNP GFSPHFEISK RLEHWSNAAL
401: STNIPQSDVH SKPDTLEWNA FCDSASPLVN PNLDTNPASL CRNTGFGSTN AAQTDFFYPL QMNQQPANNS GPVTEAQLFR SSNPNEGLLM GQQKLQSGLM
501: ASDAGSLDDI VNSLMTQEQS QSDFSEGDWD LDGLAHSEHA YEKLHFPFSL SA
101: PKYVMKGVKH GACDYLLKPV RIEELKNIWQ HVVRKSKLKK NKSNVSNGSG NCDKANRKRK EQYEEEEEEE RGNDNDDPTA QKKPRVLWTH ELHNKFLAAV
201: DHLGVERAVP KKILDLMNVD KLTRENVASH LQKFRVALKK VSDDAIQQAN RAAIDSHFMQ MNSQKGLGGF YHHHRGIPVG SGQFHGGTTM MRHYSSNRNL
301: GRLNSLGAGM FQPVSSSFPR NHNDGGNILQ GLPLEELQIN NNINRAFPSF TSQQNSPMVA PSNLLLLEGN PQSSSLPSNP GFSPHFEISK RLEHWSNAAL
401: STNIPQSDVH SKPDTLEWNA FCDSASPLVN PNLDTNPASL CRNTGFGSTN AAQTDFFYPL QMNQQPANNS GPVTEAQLFR SSNPNEGLLM GQQKLQSGLM
501: ASDAGSLDDI VNSLMTQEQS QSDFSEGDWD LDGLAHSEHA YEKLHFPFSL SA
Arabidopsis Description
ARR10Two-component response regulator ARR10 [Source:UniProtKB/Swiss-Prot;Acc:O49397]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.