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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033271.1-P Field mustard vacuole 99.58 99.58
CDY15187 Canola vacuole 98.75 98.75
AT1G01300.1 Thale cress vacuole 90.44 89.69
KRG97194 Soybean endoplasmic reticulum 71.73 73.09
KRH68920 Soybean nucleus 69.65 72.67
PGSC0003DMT400000651 Potato vacuole 69.02 69.17
KRH47900 Soybean nucleus 67.78 68.92
VIT_15s0046g00360.t01 Wine grape extracellular 70.06 68.92
KRH06457 Soybean endoplasmic reticulum, vacuole 68.19 68.91
Solyc01g096040.2.1 Tomato nucleus, plastid 68.61 68.61
Solyc10g009410.1.1 Tomato extracellular 63.2 66.38
CDX89133 Canola vacuole 66.32 66.05
CDY43952 Canola vacuole 65.9 65.63
CDX67868 Canola vacuole 65.9 65.36
PGSC0003DMT400048585 Potato vacuole 62.37 65.08
CDY25081 Canola vacuole 64.66 64.12
Os01t0598600-01 Rice nucleus 57.17 55.0
TraesCS3A01G214100.1 Wheat nucleus 55.72 54.92
TraesCS3D01G216700.1 Wheat vacuole 55.51 54.6
Zm00001d044390_P001 Maize plasma membrane 53.85 53.4
HORVU3Hr1G052320.1 Barley mitochondrion, plasma membrane, plastid, vacuole 55.93 53.37
Os05t0590000-01 Rice extracellular 52.6 52.6
KXG22664 Sorghum extracellular, plastid, vacuole 53.85 51.7
EES01017 Sorghum mitochondrion, plastid 55.3 51.35
TraesCS3B01G244800.1 Wheat plastid 55.93 50.85
GSMUA_Achr3P31640_001 Banana cytosol 58.84 50.36
TraesCS3A01G287800.1 Wheat cytosol 35.97 48.46
CDY24483 Canola vacuole 49.06 48.07
CDY24395 Canola plasma membrane 47.61 47.51
CDX92240 Canola plastid 48.44 47.45
CDY69364 Canola endoplasmic reticulum, vacuole 49.06 47.11
CDY51131 Canola plasma membrane 42.41 46.79
CDX75968 Canola extracellular, plasma membrane 48.86 46.72
CDX82342 Canola extracellular, vacuole 48.44 46.69
CDY18523 Canola vacuole 48.44 46.69
CDY03848 Canola plasma membrane 46.57 46.19
EES16428 Sorghum extracellular 46.15 44.94
OQU92922 Sorghum vacuole 45.32 44.49
KXG24090 Sorghum extracellular 45.11 43.84
Os01t0720000-00 Rice vacuole 40.54 43.72
CDY25371 Canola vacuole 35.55 43.07
CDY24567 Canola extracellular, vacuole 35.34 43.04
OQU79707 Sorghum vacuole 44.91 42.94
KXG24092 Sorghum vacuole 43.87 42.89
HORVU3Hr1G068330.1 Barley plastid, vacuole 39.29 42.86
TraesCS3D01G287600.1 Wheat vacuole 39.29 42.28
TraesCS3B01G322500.1 Wheat vacuole 38.67 41.99
Zm00001d043617_P001 Maize endoplasmic reticulum, extracellular, vacuole 39.29 41.81
KXG33265 Sorghum vacuole 38.25 40.44
CDY40117 Canola extracellular, vacuole 35.55 35.85
CDX85746 Canola vacuole 35.34 35.64
CDX69804 Canola vacuole 34.3 34.66
CDX97055 Canola cytosol, plastid, vacuole 29.73 34.13
CDX97058 Canola cytosol, extracellular, nucleus 34.51 33.81
CDX97054 Canola extracellular, plastid, vacuole 32.85 33.4
CDY70207 Canola plastid, vacuole 32.43 33.05
CDX87358 Canola mitochondrion 27.86 32.68
CDY72573 Canola plastid, vacuole 28.69 31.72
CDY53652 Canola vacuole 32.22 29.81
CDY40116 Canola extracellular 29.52 29.65
CDX88562 Canola golgi, vacuole 29.52 29.16
CDX67980 Canola vacuole 29.52 29.16
CDX79836 Canola vacuole 31.6 29.12
CDX85747 Canola extracellular, vacuole 28.9 29.08
CDX98347 Canola vacuole 32.64 28.97
CDX79338 Canola vacuole 29.11 28.75
CDX67775 Canola vacuole 32.64 28.7
CDX69805 Canola cytosol 26.82 22.63
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10GO:A0A078DS62InterPro:Aspartic_peptidase_A1EnsemblPlants:CDX90023ProteinID:CDX90023
ProteinID:CDX90023.1InterPro:CND41-likeGO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00150523001InterPro:IPR021109
InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PRINTS:PR00792PFscan:PS51767
PANTHER:PTHR13683PANTHER:PTHR13683:SF308InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_C
InterPro:TAXi_NTMHMM:TMhelixUniParc:UPI0004EDB0BCSEG:seg::
Description
BnaA10g00590D
Coordinates
chrLK031861:+:1302239..1303684
Molecular Weight (calculated)
51993.0 Da
IEP (calculated)
9.659
GRAVY (calculated)
-0.088
Length
481 amino acids
Sequence
(BLAST)
001: MEGRRNALLF TLCFFFFSLP SLSSLPAYQT LVPTSHSLPS ASPTSFQPES EPVSESLIGS GSDSDSSITL NLDHIDALST NRTPEELFSS RLQRDSRRVK
101: SIATLAARIP RRNTTHAPRP GGFSSSVVSG LSQGSGEYFT RLGVGTPARY VYMVLDTGSD IVWLQCAPCR RCYSQSDPIF DPRKSRTYST IPCSSPLCRR
201: LDSAGCNTRR RTCLYQVSYG DGSFTVGDFA TETLTFRRNR VKGVAVGCGH DNEGLFVGAA GLLGLGKGRL SFPGQTGRRF NQKFSYCLVD RSASSKPSSV
301: VFGNAAVSRT AKFTPLLSNP KLDTFYYVEL LGISVGGTRV PGVAASLFKL DPIGNGGVII DSGTSVTRLV RPAYIAMRDA FRVGAKSLKR APDYSLFDTC
401: FDLSHQNEVK VPTVVLHFRG ADVSLPATNY LIPVDTNGKF CFAFAGTMSG LSIIGNIQQQ GFRVVYDLMG SRVGFAPRGC A
Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.