CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
extracellular 4
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004734.1-P	Field mustard	vacuole	95.19	94.83
CDX79836	Canola	vacuole	95.19	94.83
AT2G42980.1	Thale cress	vacuole	82.69	81.59
CDX67775	Canola	vacuole	74.04	70.38
CDX98347	Canola	vacuole	73.08	70.11
Solyc05g016310.1.1	Tomato	vacuole	61.54	60.84
PGSC0003DMT400095799	Potato	vacuole	61.92	60.07
PGSC0003DMT400091831	Potato	vacuole	62.31	59.23
KRH46018	Soybean	vacuole	62.88	58.71
KRG98962	Soybean	vacuole	63.08	58.57
VIT_12s0028g00610.t01	Wine grape	extracellular	61.35	58.42
Solyc07g045100.1.1	Tomato	vacuole	61.35	58.11
KRH73625	Soybean	vacuole	62.12	57.58
GSMUA_Achr3P03130_001	Banana	vacuole	54.23	53.92
KRG98063	Soybean	vacuole	53.46	51.87
KRH30714	Soybean	vacuole	52.88	50.64
TraesCS7D01G516100.1	Wheat	vacuole	47.5	50.1
TraesCS7B01G445000.1	Wheat	vacuole	48.65	50.0
TraesCS7A01G528000.1	Wheat	vacuole	47.12	49.9
TraesCS7B01G444800.1	Wheat	vacuole	47.31	49.8
EER97501	Sorghum	vacuole	49.42	49.71
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	51.35	49.44
GSMUA_Achr6P13720_001	Banana	vacuole	50.38	49.16
TraesCS7A01G528200.1	Wheat	vacuole	48.46	49.03
Os02t0314600-01	Rice	extracellular	48.27	48.83
TraesCS7D01G516400.1	Wheat	vacuole	47.88	48.82
Zm00001d022078_P001	Maize	vacuole	46.92	47.66
Zm00001d006330_P001	Maize	vacuole	46.73	47.65
EER97174	Sorghum	vacuole	47.88	47.43
HORVU7Hr1G116780.2	Barley	plastid	48.08	45.87
KRH14503	Soybean	vacuole	61.73	43.91
Zm00001d040433_P001	Maize	cytosol	25.0	36.41
HORVU7Hr1G116810.1	Barley	plastid	24.62	35.96
CDX87358	Canola	mitochondrion	25.77	32.68
CDX90023	Canola	vacuole	29.81	32.22
CDX89133	Canola	vacuole	29.81	32.09
CDY15187	Canola	vacuole	29.62	32.02
CDX67868	Canola	vacuole	29.81	31.96
CDY24395	Canola	plasma membrane	29.42	31.74
CDY43952	Canola	vacuole	29.42	31.68
CDY51131	Canola	plasma membrane	26.54	31.65
CDY03848	Canola	plasma membrane	29.23	31.34
CDX97055	Canola	cytosol, plastid, vacuole	25.19	31.26
CDX85746	Canola	vacuole	28.65	31.24
CDY25081	Canola	vacuole	29.04	31.13
CDX69804	Canola	vacuole	28.46	31.09
CDY24483	Canola	vacuole	29.23	30.96
CDY40117	Canola	extracellular, vacuole	28.27	30.82
CDX92240	Canola	plastid	29.04	30.75
CDX97054	Canola	extracellular, plastid, vacuole	27.5	30.23
CDX97058	Canola	cytosol, extracellular, nucleus	28.46	30.14
CDY69364	Canola	endoplasmic reticulum, vacuole	29.04	30.14
CDY70207	Canola	plastid, vacuole	27.31	30.08
CDY18523	Canola	vacuole	28.85	30.06
CDX82342	Canola	extracellular, vacuole	28.46	29.66
CDX75968	Canola	extracellular, plasma membrane	28.46	29.42
CDY72573	Canola	plastid, vacuole	24.23	28.97
CDX88562	Canola	golgi, vacuole	26.73	28.54
CDX67980	Canola	vacuole	26.54	28.34
CDX79338	Canola	vacuole	26.35	28.13
CDY24567	Canola	extracellular, vacuole	20.38	26.84
CDY25371	Canola	vacuole	20.38	26.7
CDX85747	Canola	extracellular, vacuole	23.08	25.1
CDY40116	Canola	extracellular	23.08	25.05
CDX69805	Canola	cytosol	21.92	20.0

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	GO:A0A078IUH3	UniProt:A0A078IUH3	InterPro:Aspartic_peptidase_A1	EnsemblPlants:CDY53652
ProteinID:CDY53652	ProteinID:CDY53652.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00011136001	InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543
PRINTS:PR00792	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF250	InterPro:Pepsin-like_plant	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0004EABD36	SEG:seg

Description

BnaC04g52860DBnaC04g52860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUH3]

Coordinates

chrLK033224:-:9832..11394

Molecular Weight (calculated)

57828.0 Da

IEP (calculated)

5.837

GRAVY (calculated)

-0.341

Length

520 amino acids

Sequence
(BLAST)

001: MSAKLSLILC LITVTPFSCD CRTLSGKHEH NSSSLYGFSF QDSMHVSSST SNDCGFSSTE HDPAKDHPKE SMKFQLRRRE IKQESKRTTH SVVDLQIQDL
101: TRIQTLHARA KKAKNQTHKK EEKKITSVIA PEASPGQLVA TLESGMTLGS GEYFMDVLVG TPPKHFSLIL DTGSDLNWLQ CLPCYDCFHQ HGPFYDPETS
201: SSFKNITCKD PRCSLISSPE PSVPCESNNQ SCPYFYWYGD RSNTTGDFAV ETFTVNLTNA KGGSSEYKVE DMMFGCGHWN RGLFNGASGL LGLGRGPLSF
301: SSQLQSLYGH SFSYCLVDRN SDTNVSSKLI FGEDKGLLNN PNLNFTSFVH NKETSVETFY YLQIKSILVN GQALDIPQET WNISSDGAGG TIIDSGTTLS
401: YFAEPAYKII KNKITEKVKE KYHVFEDFPI LDPCFNVSGV EESNMELPEL GIAFADGAVW NFPAENVFIW LSEEVVCLAI LGTPESSMSI IGNYQQQNFH
501: ILYDTKRSRL GFAPTKCADI

Best Arabidopsis Sequence Match ( AT2G42980.1 )
(BLAST)

001: MSTKLSIFLL GLILFSVSPF SGDCRTLSGK HEHYSSSLNM FNSQDTMRFS SASSSTSNDC GFSSKEHDPS KEHTRESVKP QSRIKQETKR TTHSVVDLQI
101: QDLTRIKTLH ARFNKSKKQK NEKVRKKITS DISLVGAPEV SPGKLIATLE SGMTLGSGEY FMDVLVGTPP KHFSLILDTG SDLNWLQCLP CYDCFHQNGM
201: FYDPKTSASF KNITCNDPRC SLISSPDPPV QCESDNQSCP YFYWYGDRSN TTGDFAVETF TVNLTTTEGG SSEYKVGNMM FGCGHWNRGL FSGASGLLGL
301: GRGPLSFSSQ LQSLYGHSFS YCLVDRNSNT NVSSKLIFGE DKDLLNHTNL NFTSFVNGKE NSVETFYYIQ IKSILVGGKA LDIPEETWNI SSDGDGGTII
401: DSGTTLSYFA EPAYEIIKNK FAEKMKENYP IFRDFPVLDP CFNVSGIEEN NIHLPELGIA FVDGTVWNFP AENSFIWLSE DLVCLAILGT PKSTFSIIGN
501: YQQQNFHILY DTKRSRLGFT PTKCADI

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJG1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.