CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035139.1-P	Field mustard	plastid	50.49	96.73
CDX88562	Canola	golgi, vacuole	95.85	80.7
CDX79338	Canola	vacuole	89.02	74.95
CDX67980	Canola	vacuole	88.78	74.74
AT1G79720.1	Thale cress	extracellular, golgi, vacuole	86.83	73.55
PGSC0003DMT400036706	Potato	vacuole	63.41	54.85
Solyc03g117690.2.1	Tomato	vacuole	63.41	54.62
KRH44589	Soybean	extracellular, vacuole	64.15	54.56
GSMUA_Achr4P04280_001	Banana	cytosol	34.88	54.37
KRH47308	Soybean	extracellular	63.66	54.26
VIT_09s0018g01670.t01	Wine grape	vacuole	62.44	53.78
KRH09627	Soybean	vacuole	61.22	53.4
PGSC0003DMT400074390	Potato	vacuole	60.49	52.88
KRH57273	Soybean	endoplasmic reticulum, golgi	36.59	52.45
Solyc06g068550.2.1	Tomato	extracellular	60.0	52.12
GSMUA_Achr5P16410_001	Banana	cytosol	46.34	48.1
Os09t0423500-01	Rice	endoplasmic reticulum, vacuole	52.44	45.45
TraesCS5B01G220700.1	Wheat	endoplasmic reticulum	50.73	45.22
TraesCS5A01G221900.1	Wheat	endoplasmic reticulum, golgi	50.49	44.81
HORVU5Hr1G064080.3	Barley	endoplasmic reticulum, golgi	50.24	44.4
TraesCS5D01G229700.1	Wheat	endoplasmic reticulum, golgi	49.51	43.94
GSMUA_Achr9P22770_001	Banana	cytosol, golgi, mitochondrion, peroxisome	31.95	42.67
Zm00001d020536_P001	Maize	extracellular	50.98	41.8
EER96754	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	51.95	41.6
Os08t0267300-00	Rice	plasma membrane, vacuole	49.76	38.93
HORVU5Hr1G093290.1	Barley	mitochondrion, vacuole	47.56	38.01
TraesCS5D01G386300.1	Wheat	plastid, vacuole	47.56	37.79
EES14825	Sorghum	plastid	49.76	37.57
CDX97055	Canola	cytosol, plastid, vacuole	37.8	36.99
CDX85746	Canola	vacuole	41.46	35.64
CDY40117	Canola	extracellular, vacuole	41.46	35.64
CDX97054	Canola	extracellular, plastid, vacuole	40.49	35.1
Zm00001d050178_P001	Maize	plasma membrane	49.76	34.87
TraesCS5B01G379900.1	Wheat	mitochondrion	47.56	34.82
CDX69804	Canola	vacuole	40.0	34.45
TraesCS5A01G376300.1	Wheat	extracellular, plastid, vacuole	46.83	34.35
CDY72573	Canola	plastid, vacuole	36.1	34.02
CDX97058	Canola	cytosol, extracellular, nucleus	40.49	33.81
CDY70207	Canola	plastid, vacuole	38.05	33.05
CDY51131	Canola	plasma membrane	31.22	29.36
CDY03848	Canola	plasma membrane	34.39	29.07
CDY24395	Canola	plasma membrane	34.15	29.05
CDX67868	Canola	vacuole	33.9	28.66
CDX89133	Canola	vacuole	33.66	28.57
CDY25081	Canola	vacuole	33.66	28.45
CDY43952	Canola	vacuole	33.17	28.16
CDY15187	Canola	vacuole	32.68	27.86
CDX90023	Canola	vacuole	32.68	27.86
CDX85747	Canola	extracellular, vacuole	31.95	27.41
CDY40116	Canola	extracellular	31.71	27.14
CDY25371	Canola	vacuole	25.85	26.7
CDY24567	Canola	extracellular, vacuole	25.37	26.33
CDY24483	Canola	vacuole	30.98	25.87
CDY53652	Canola	vacuole	32.68	25.77
CDX92240	Canola	plastid	30.73	25.66
CDX79836	Canola	vacuole	32.44	25.48
CDY18523	Canola	vacuole	30.98	25.45
CDY69364	Canola	endoplasmic reticulum, vacuole	30.98	25.35
CDX82342	Canola	extracellular, vacuole	30.73	25.25
CDX75968	Canola	extracellular, plasma membrane	30.98	25.25
CDX98347	Canola	vacuole	30.98	23.43
CDX67775	Canola	vacuole	31.22	23.4
CDX69805	Canola	cytosol	31.95	22.98

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	GO:A0A078DJD2	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	EnsemblPlants:CDX87358
ProteinID:CDX87358	ProteinID:CDX87358.1	InterPro:CND41-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00146326001
InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	ScanProsite:PS00141
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF263	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C
InterPro:TAXi_N	UniParc:UPI0004EDD0B0	SEG:seg	:	:	:

Description

BnaA07g35150D

Coordinates

chrLK031850:+:271025..272257

Molecular Weight (calculated)

44243.6 Da

IEP (calculated)

6.048

GRAVY (calculated)

-0.090

Length

410 amino acids

Sequence
(BLAST)

001: MKHRGLCSGK TIDWGKKLRR ALTLDNLRVQ SLQLRIKSMS STTTDSISET QLPLTSGVKL ETLNYIITVE LGGKNMTLIV DTGSDLTWVQ CQPCKSCYNQ
101: QGPLYDPSVS SSYKTVLCNS STCQDLVAAT SNPDRCGGSN GVEKTSCDYV VSYGDGSYTR GDLGSESIQL GDTKVENFVF GCGRSNKGLF GGASGLMGLG
201: RSSVSLVYQT MKTFNGVFSY CLPSLEDGAS GSLSFGDYKN STSVSYTPLV QNLQLRSFYI LNLTGATIGG VELESPSFGR GIIIDSGTVI TRLPPSIYKA
301: VKTEFLKQFT GFPSAPGYSI LDTCFNLTSY QDVSIPTIKM IFQGNAVLEV DVSGVFYYVN PDASLVCLAL ASLSYENEVG IIGNYQQKNQ RVVYDTKQEK
401: LGIAGENCSI

Best Arabidopsis Sequence Match ( AT1G79720.1 )
(BLAST)

001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV

Arabidopsis Description

At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.