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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 6
  • extracellular 6
  • vacuole 5
  • plasma membrane 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, vacuole
Any Predictor:secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035139.1-P Field mustard plastid 39.46 89.25
CDX87358 Canola mitochondrion 73.55 86.83
Bra003596.1-P Field mustard vacuole 86.57 86.04
CDX79338 Canola vacuole 86.16 85.63
CDX67980 Canola vacuole 85.95 85.42
CDX88562 Canola golgi, vacuole 82.23 81.72
VIT_09s0018g01670.t01 Wine grape vacuole 58.06 59.03
PGSC0003DMT400036706 Potato vacuole 56.82 58.02
KRH47308 Soybean extracellular 57.44 57.8
KRH44589 Soybean extracellular, vacuole 57.44 57.68
Solyc03g117690.2.1 Tomato vacuole 56.61 57.56
GSMUA_Achr4P04280_001 Banana cytosol 30.99 57.03
PGSC0003DMT400074390 Potato vacuole 54.96 56.72
KRH09627 Soybean vacuole 54.55 56.17
Solyc06g068550.2.1 Tomato extracellular 54.13 55.51
KRH57273 Soybean endoplasmic reticulum, golgi 32.02 54.2
GSMUA_Achr5P16410_001 Banana cytosol 40.5 49.62
Os09t0423500-01 Rice endoplasmic reticulum, vacuole 46.28 47.36
TraesCS5B01G220700.1 Wheat endoplasmic reticulum 44.83 47.17
TraesCS5A01G221900.1 Wheat endoplasmic reticulum, golgi 44.83 46.97
TraesCS5D01G229700.1 Wheat endoplasmic reticulum, golgi 44.42 46.54
HORVU5Hr1G064080.3 Barley endoplasmic reticulum, golgi 44.42 46.34
GSMUA_Achr9P22770_001 Banana cytosol, golgi, mitochondrion, peroxisome 28.72 45.28
Zm00001d020536_P001 Maize extracellular 45.45 44.0
EER96754 Sorghum endoplasmic reticulum, extracellular, plasma membrane 46.28 43.75
HORVU5Hr1G093290.1 Barley mitochondrion, vacuole 44.63 42.11
TraesCS5D01G386300.1 Wheat plastid, vacuole 44.83 42.05
Os08t0267300-00 Rice plasma membrane, vacuole 45.25 41.79
EES14825 Sorghum plastid 45.25 40.33
TraesCS5B01G379900.1 Wheat mitochondrion 44.63 38.57
TraesCS5A01G376300.1 Wheat extracellular, plastid, vacuole 44.21 38.28
AT5G10770.1 Thale cress vacuole 37.4 38.19
Zm00001d050178_P001 Maize plasma membrane 44.42 36.75
AT5G10760.1 Thale cress vacuole 33.68 35.13
AT1G25510.1 Thale cress vacuole 29.75 29.81
AT3G20015.1 Thale cress endoplasmic reticulum, vacuole 28.51 29.36
AT3G61820.1 Thale cress extracellular, vacuole 28.72 28.78
AT1G01300.1 Thale cress vacuole 28.72 28.66
AT3G18490.1 Thale cress plastid 27.89 27.0
AT2G42980.1 Thale cress vacuole 27.69 25.43
AT3G59080.1 Thale cress vacuole 27.89 25.23
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:844311MEROPS:A01.A07UniProt:A0A178W1P1ProteinID:AEE36291.1
EMBL:AK117694ArrayExpress:AT1G79720EnsemblPlantsGene:AT1G79720RefSeq:AT1G79720TAIR:AT1G79720RefSeq:AT1G79720-TAIR-G
EnsemblPlants:AT1G79720.1TAIR:AT1G79720.1EMBL:AY090445InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_ASUnigene:At.43798
EMBL:BT029166InterPro:CND41-likeGO:GO:0003674GO:GO:0003824GO:GO:0004190GO:GO:0005575
GO:GO:0005576GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056
GO:GO:0016787GO:GO:0019538GO:GO:0030163GO:GO:0048046InterPro:IPR021109InterPro:IPR033121
RefSeq:NP_565219.1ProteinID:OAP12188.1InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281ScanProsite:PS00141
PFscan:PS51257PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF263InterPro:Peptidase_aspartic_dom_sfUniProt:Q8RX60
SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NTMHMM:TMhelixUniParc:UPI00000ABFF5
SEG:seg:::::
Description
At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
Coordinates
chr1:-:29997127..29999045
Molecular Weight (calculated)
52398.8 Da
IEP (calculated)
7.867
GRAVY (calculated)
-0.001
Length
484 amino acids
Sequence
(BLAST)
001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.