Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87358 | Canola | mitochondrion | 80.7 | 95.85 |
| CDX79338 | Canola | vacuole | 86.45 | 86.45 |
| CDX67980 | Canola | vacuole | 86.24 | 86.24 |
| AT1G79720.1 | Thale cress | extracellular, golgi, vacuole | 81.72 | 82.23 |
| VIT_09s0018g01670.t01 | Wine grape | vacuole | 56.47 | 57.77 |
| KRH47308 | Soybean | extracellular | 56.26 | 56.96 |
| PGSC0003DMT400036706 | Potato | vacuole | 55.24 | 56.75 |
| Solyc03g117690.2.1 | Tomato | vacuole | 55.44 | 56.72 |
| KRH44589 | Soybean | extracellular, vacuole | 56.06 | 56.64 |
| GSMUA_Achr4P04280_001 | Banana | cytosol | 30.18 | 55.89 |
| PGSC0003DMT400074390 | Potato | vacuole | 53.39 | 55.44 |
| KRH09627 | Soybean | vacuole | 53.39 | 55.32 |
| Solyc06g068550.2.1 | Tomato | extracellular | 52.98 | 54.66 |
| KRH57273 | Soybean | endoplasmic reticulum, golgi | 31.01 | 52.8 |
| GSMUA_Achr5P16410_001 | Banana | cytosol | 38.81 | 47.85 |
| TraesCS5A01G221900.1 | Wheat | endoplasmic reticulum, golgi | 44.56 | 46.97 |
| TraesCS5B01G220700.1 | Wheat | endoplasmic reticulum | 44.35 | 46.96 |
| Os09t0423500-01 | Rice | endoplasmic reticulum, vacuole | 45.59 | 46.93 |
| HORVU5Hr1G064080.3 | Barley | endoplasmic reticulum, golgi | 44.15 | 46.34 |
| TraesCS5D01G229700.1 | Wheat | endoplasmic reticulum, golgi | 43.74 | 46.1 |
| Zm00001d020536_P001 | Maize | extracellular | 44.76 | 43.6 |
| EER96754 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 45.59 | 43.36 |
| GSMUA_Achr9P22770_001 | Banana | cytosol, golgi, mitochondrion, peroxisome | 27.31 | 43.32 |
| Os08t0267300-00 | Rice | plasma membrane, vacuole | 44.97 | 41.79 |
| HORVU5Hr1G093290.1 | Barley | mitochondrion, vacuole | 42.3 | 40.16 |
| TraesCS5D01G386300.1 | Wheat | plastid, vacuole | 42.51 | 40.12 |
| EES14825 | Sorghum | plastid | 43.94 | 39.41 |
| TraesCS5B01G379900.1 | Wheat | mitochondrion | 42.71 | 37.14 |
| TraesCS5A01G376300.1 | Wheat | extracellular, plastid, vacuole | 42.3 | 36.85 |
| CDY40117 | Canola | extracellular, vacuole | 35.93 | 36.69 |
| CDX85746 | Canola | vacuole | 35.93 | 36.69 |
| CDX97055 | Canola | cytosol, plastid, vacuole | 31.21 | 36.28 |
| Zm00001d050178_P001 | Maize | plasma membrane | 43.53 | 36.24 |
| CDX97054 | Canola | extracellular, plastid, vacuole | 34.7 | 35.73 |
| CDX69804 | Canola | vacuole | 34.7 | 35.5 |
| CDY72573 | Canola | plastid, vacuole | 31.21 | 34.94 |
| CDX97058 | Canola | cytosol, extracellular, nucleus | 34.91 | 34.62 |
| CDY70207 | Canola | plastid, vacuole | 32.24 | 33.26 |
| CDY51131 | Canola | plasma membrane | 27.1 | 30.28 |
| CDY03848 | Canola | plasma membrane | 29.98 | 30.1 |
| CDX89133 | Canola | vacuole | 29.77 | 30.02 |
| CDY24395 | Canola | plasma membrane | 29.57 | 29.88 |
| CDX67868 | Canola | vacuole | 29.57 | 29.69 |
| CDY15187 | Canola | vacuole | 29.16 | 29.52 |
| CDX90023 | Canola | vacuole | 29.16 | 29.52 |
| CDX85747 | Canola | extracellular, vacuole | 28.95 | 29.5 |
| CDY40116 | Canola | extracellular | 28.95 | 29.44 |
| CDY25081 | Canola | vacuole | 29.16 | 29.28 |
| CDY43952 | Canola | vacuole | 28.95 | 29.19 |
| CDY25371 | Canola | vacuole | 23.41 | 28.72 |
| CDY24567 | Canola | extracellular, vacuole | 23.0 | 28.35 |
| CDY24483 | Canola | vacuole | 27.72 | 27.49 |
| CDX92240 | Canola | plastid | 27.52 | 27.29 |
| CDY69364 | Canola | endoplasmic reticulum, vacuole | 27.72 | 26.95 |
| CDY18523 | Canola | vacuole | 27.52 | 26.85 |
| CDX75968 | Canola | extracellular, plasma membrane | 27.72 | 26.84 |
| CDY53652 | Canola | vacuole | 28.54 | 26.73 |
| CDX82342 | Canola | extracellular, vacuole | 27.31 | 26.65 |
| CDX79836 | Canola | vacuole | 28.34 | 26.44 |
| CDX98347 | Canola | vacuole | 26.69 | 23.99 |
| CDX67775 | Canola | vacuole | 26.9 | 23.95 |
| CDX69805 | Canola | cytosol | 27.93 | 23.86 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | GO:A0A078DI08 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | EnsemblPlants:CDX88562 |
| ProteinID:CDX88562 | ProteinID:CDX88562.1 | InterPro:CND41-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00148124001 |
| InterPro:IPR021109 | InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | ScanProsite:PS00141 |
| PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF263 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-TM |
| InterPro:TAXi_C | InterPro:TAXi_N | TMHMM:TMhelix | UniParc:UPI0004EBEC4C | SEG:seg | : |
Description
BnaC06g40060D
Coordinates
chrLK031855:-:1648551..1650597
Molecular Weight (calculated)
52693.0 Da
IEP (calculated)
7.719
GRAVY (calculated)
-0.033
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKKATFLPL NLSLAPFLLV LLYLLMLCVN VAHSAHEKKI LSLHNNIWSL TKSNEPSSSC FSHNLAKGRE SSSTTLGMKH RGLCSGKTID WGKKLRRALT
101: LDNLRVQSLQ LRIKAMSSTT TDSISETQVP LTSGVKLETL NYIITVELGG RNMTLVVDTG SDLTWVQCQP CKSCYNQQGP LYDPSVSSSY KTVLCNSSTC
201: QDLVAATSNP DRCGGSYGVE KTSCDYVVSY GDGSYTRGDL GSESIQLGDI KVENFVFGCG RSNKGLFGGA SGLTGLGRSS VSLVTQTMKT FNGVFSYCLP
301: SLEDGASGSL SFGDYKNLTS VSYTPLVQHP QLRSFYILNL TGATIGGVEL ESPSFGRGII IDSGTVITRL PPSIYKAVKT EFLKQFTGFP SVPGYSILDT
401: CFNLTSYQDV SIPTIKMIFQ GDAELEVDVT GVFYYVNPDA SLVCLALASL SNENEVGIIG NYQQKNQRVV YDTKQMKLGI AGENCSI
101: LDNLRVQSLQ LRIKAMSSTT TDSISETQVP LTSGVKLETL NYIITVELGG RNMTLVVDTG SDLTWVQCQP CKSCYNQQGP LYDPSVSSSY KTVLCNSSTC
201: QDLVAATSNP DRCGGSYGVE KTSCDYVVSY GDGSYTRGDL GSESIQLGDI KVENFVFGCG RSNKGLFGGA SGLTGLGRSS VSLVTQTMKT FNGVFSYCLP
301: SLEDGASGSL SFGDYKNLTS VSYTPLVQHP QLRSFYILNL TGATIGGVEL ESPSFGRGII IDSGTVITRL PPSIYKAVKT EFLKQFTGFP SVPGYSILDT
401: CFNLTSYQDV SIPTIKMIFQ GDAELEVDVT GVFYYVNPDA SLVCLALASL SNENEVGIIG NYQQKNQRVV YDTKQMKLGI AGENCSI
001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV
Arabidopsis Description
At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.