CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 6
plasma membrane 4
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY32970
CDY43592

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G18490.1	CDY32970	AT5G42980.1	15352244
AT3G18490.1	CDY43592	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92240	Canola	plastid	97.56	97.56
Bra022325.1-P	Field mustard	plastid	97.35	97.35
CDY69364	Canola	endoplasmic reticulum, vacuole	87.17	85.43
CDY18523	Canola	vacuole	86.35	84.97
AT3G18490.1	Thale cress	plastid	82.08	80.6
CDX82342	Canola	extracellular, vacuole	80.04	78.76
CDX75968	Canola	extracellular, plasma membrane	80.65	78.73
KRH39233	Soybean	nucleus	61.91	61.79
VIT_17s0000g03990.t01	Wine grape	endoplasmic reticulum, plasma membrane	59.27	58.67
PGSC0003DMT400014352	Potato	endoplasmic reticulum, vacuole	57.84	58.44
GSMUA_Achr7P11900_001	Banana	vacuole	54.38	56.09
PGSC0003DMT400010420	Potato	endoplasmic reticulum, plastid	54.99	54.99
CDY51131	Canola	plasma membrane	48.47	54.59
Solyc06g069220.1.1	Tomato	extracellular	54.18	53.74
CDY24395	Canola	plasma membrane	52.75	53.73
Solyc03g119690.1.1	Tomato	plastid	57.23	52.62
CDY03848	Canola	plasma membrane	51.93	52.58
EES02514	Sorghum	endoplasmic reticulum, vacuole	53.36	51.47
Zm00001d039910_P001	Maize	vacuole	52.75	51.19
TraesCS3B01G064700.1	Wheat	endoplasmic reticulum, vacuole	52.14	50.89
Os01t0140100-01	Rice	plastid	52.14	50.79
TraesCS3A01G053600.1	Wheat	endoplasmic reticulum, vacuole	52.14	50.59
GSMUA_Achr4P24330_001	Banana	vacuole	43.38	49.65
CDY15187	Canola	vacuole	48.07	49.06
CDX90023	Canola	vacuole	48.07	49.06
CDX89133	Canola	vacuole	47.45	48.24
CDY43952	Canola	vacuole	46.44	47.2
CDX67868	Canola	vacuole	46.23	46.8
HORVU3Hr1G009980.3	Barley	plastid	49.69	46.65
CDY25081	Canola	vacuole	45.21	45.77
GSMUA_Achr10P...	Banana	plasma membrane, plastid, vacuole	54.38	44.06
CDY25371	Canola	vacuole	34.22	42.32
CDY24567	Canola	extracellular, vacuole	34.01	42.28
CDX97055	Canola	cytosol, plastid, vacuole	28.51	33.41
CDX69804	Canola	vacuole	32.18	33.19
CDX85746	Canola	vacuole	31.57	32.49
CDX97054	Canola	extracellular, plastid, vacuole	31.16	32.35
CDY40117	Canola	extracellular, vacuole	31.36	32.29
CDY72573	Canola	plastid, vacuole	28.51	32.18
CDX97058	Canola	cytosol, extracellular, nucleus	31.77	31.77
CDX87358	Canola	mitochondrion	25.87	30.98
CDY70207	Canola	plastid, vacuole	29.74	30.93
CDY53652	Canola	vacuole	30.96	29.23
CDY40116	Canola	extracellular	27.9	28.6
CDX79836	Canola	vacuole	30.14	28.35
CDX67980	Canola	vacuole	27.9	28.13
CDX85747	Canola	extracellular, vacuole	27.29	28.03
CDX79338	Canola	vacuole	27.7	27.93
CDX88562	Canola	golgi, vacuole	27.49	27.72
CDX67775	Canola	vacuole	30.35	27.24
CDX98347	Canola	vacuole	29.53	26.75
CDX69805	Canola	cytosol	25.46	21.93

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	GO:A0A078GIN3	UniProt:A0A078GIN3	InterPro:ASPG1	InterPro:Aspartic_peptidase_A1
EnsemblPlants:CDY24483	ProteinID:CDY24483	ProteinID:CDY24483.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009414
GO:GO:0009628	GO:GO:0009719	GO:GO:0009737	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00026766001
InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF531	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	UniParc:UPI0003E75592	SEG:seg	:	:	:

Description

BnaC05g34710DBnaC05g34710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIN3]

Coordinates

chrLK032159:-:471996..474911

Molecular Weight (calculated)

51847.0 Da

IEP (calculated)

6.494

GRAVY (calculated)

0.001

Length

491 amino acids

Sequence
(BLAST)

001: MASARFLSLL PIVTLSLLLT TTDASSRSLP TSHETTVLDV VSSLQQTQQI LSIDPTRSSL TTTTAAKESI PVFLNSSSPL SLELHSRDTL VASQHKNYKS
101: LVLSRLERDS SRVASIIAKV KLAVEGADSE THYQPEELTT PVISGASQGS GEYFSRLGVG TPAKEMYMVL DTGSDINWIQ CKPCSSCYQQ SDPIFDPSSS
201: STYKSLTCSA PQCASLRASA CRSDKCLYQV RYGDGSFTVG EYATDTVTFG SSGKVDNVAL GCGRDNEGLF TGAAGLLGLG GGALSMTSQI KAKSFSYCLV
301: DRDSGKSSSL DFNSVQVGAG DATAPILSNS KIDTFYYVGF TGFSVGGQQV SIPSSAFAVD ASGTGGVILD CGTAVTRLQT QAYNSLRDAF VKLTANLKRG
401: TSSISLFDTC YDFSSLSTVK VPTVAFHFTG GKTLNLPAKN YLIPIDDAGT FCFAFAPTSS SLSIIGNVQQ QGTRITYDLA NHLIGLSANK C

Best Arabidopsis Sequence Match ( AT3G18490.1 )
(BLAST)

001: MAFPRFLSLL AVVTLSLFLT TTDASSRSLS TPPKTNVLDV VSSLQQTQTI LSLDPTRSSL TTTKPESLSD PVFFNSSSPL SLELHSRDTF VASQHKDYKS
101: LTLSRLERDS SRVAGIVAKI RFAVEGVDRS DLKPVYNEDT RYQTEDLTTP VVSGASQGSG EYFSRIGVGT PAKEMYLVLD TGSDVNWIQC EPCADCYQQS
201: DPVFNPTSSS TYKSLTCSAP QCSLLETSAC RSNKCLYQVS YGDGSFTVGE LATDTVTFGN SGKINNVALG CGHDNEGLFT GAAGLLGLGG GVLSITNQMK
301: ATSFSYCLVD RDSGKSSSLD FNSVQLGGGD ATAPLLRNKK IDTFYYVGLS GFSVGGEKVV LPDAIFDVDA SGSGGVILDC GTAVTRLQTQ AYNSLRDAFL
401: KLTVNLKKGS SSISLFDTCY DFSSLSTVKV PTVAFHFTGG KSLDLPAKNY LIPVDDSGTF CFAFAPTSSS LSIIGNVQQQ GTRITYDLSK NVIGLSGNKC

Arabidopsis Description

ASPG1Protein ASPARTIC PROTEASE IN GUARD CELL 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS40]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.