CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67868	Canola	vacuole	97.11	97.11
CDX89133	Canola	vacuole	84.74	85.09
CDY43952	Canola	vacuole	83.3	83.64
CDY15187	Canola	vacuole	64.12	64.66
CDX90023	Canola	vacuole	64.12	64.66
PGSC0003DMT400000651	Potato	vacuole	62.27	62.92
Solyc01g096040.2.1	Tomato	nucleus, plastid	61.86	62.37
Solyc10g009410.1.1	Tomato	extracellular	58.35	61.79
VIT_15s0046g00360.t01	Wine grape	extracellular	60.82	60.33
PGSC0003DMT400048585	Potato	vacuole	57.11	60.09
TraesCS3A01G214100.1	Wheat	nucleus	51.96	51.64
TraesCS3D01G216700.1	Wheat	vacuole	51.75	51.33
Os01t0598600-01	Rice	nucleus	52.58	51.0
Zm00001d044390_P001	Maize	plasma membrane	50.72	50.72
Os05t0590000-01	Rice	extracellular	49.9	50.31
HORVU3Hr1G052320.1	Barley	mitochondrion, plasma membrane, plastid, vacuole	52.16	50.2
KXG22664	Sorghum	extracellular, plastid, vacuole	49.9	48.3
EES01017	Sorghum	mitochondrion, plastid	51.13	47.88
TraesCS3B01G244800.1	Wheat	plastid	51.96	47.64
CDY24395	Canola	plasma membrane	46.8	47.1
GSMUA_Achr3P31640_001	Banana	cytosol	53.4	46.09
CDX92240	Canola	plastid	45.98	45.42
CDY18523	Canola	vacuole	46.6	45.29
CDY24483	Canola	vacuole	45.77	45.21
CDY51131	Canola	plasma membrane	40.62	45.18
CDY69364	Canola	endoplasmic reticulum, vacuole	46.6	45.11
CDY03848	Canola	plasma membrane	44.95	44.95
CDX82342	Canola	extracellular, vacuole	45.57	44.29
CDX75968	Canola	extracellular, plasma membrane	45.77	44.14
TraesCS3A01G287800.1	Wheat	cytosol	32.37	43.98
EES16428	Sorghum	extracellular	43.92	43.12
OQU92922	Sorghum	vacuole	43.09	42.65
Os01t0720000-00	Rice	vacuole	38.76	42.15
KXG24092	Sorghum	vacuole	42.68	42.07
KXG24090	Sorghum	extracellular	42.89	42.02
CDY25371	Canola	vacuole	34.02	41.56
CDY24567	Canola	extracellular, vacuole	33.81	41.52
OQU79707	Sorghum	vacuole	42.47	40.95
HORVU3Hr1G068330.1	Barley	plastid, vacuole	36.7	40.36
Zm00001d043617_P001	Maize	endoplasmic reticulum, extracellular, vacuole	36.7	39.38
TraesCS3D01G287600.1	Wheat	vacuole	35.88	38.93
TraesCS3B01G322500.1	Wheat	vacuole	35.46	38.83
KXG33265	Sorghum	vacuole	35.67	38.02
CDY40117	Canola	extracellular, vacuole	33.81	34.38
CDX85746	Canola	vacuole	33.61	34.17
CDX87358	Canola	mitochondrion	28.45	33.66
CDX69804	Canola	vacuole	32.78	33.4
CDX97055	Canola	cytosol, plastid, vacuole	28.66	33.17
CDX97058	Canola	cytosol, extracellular, nucleus	32.78	32.38
CDX97054	Canola	extracellular, plastid, vacuole	31.55	32.35
CDY70207	Canola	plastid, vacuole	31.13	31.99
CDY72573	Canola	plastid, vacuole	28.04	31.26
CDY40116	Canola	extracellular	29.69	30.06
CDX67980	Canola	vacuole	29.9	29.77
CDX79338	Canola	vacuole	29.69	29.57
CDX85747	Canola	extracellular, vacuole	29.07	29.5
CDX88562	Canola	golgi, vacuole	29.28	29.16
CDY53652	Canola	vacuole	31.13	29.04
CDX79836	Canola	vacuole	31.13	28.93
CDX98347	Canola	vacuole	31.75	28.41
CDX67775	Canola	vacuole	31.75	28.15
CDX69805	Canola	cytosol	27.22	23.16

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	GO:A0A078GI99	UniProt:A0A078GI99	InterPro:Aspartic_peptidase_A1	EnsemblPlants:CDY25081
ProteinID:CDY25081	ProteinID:CDY25081.1	InterPro:CND41-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00028924001	InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543
PRINTS:PR00792	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF308	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0004EBA151	SEG:seg	:

Description

BnaC06g18230DBnaC06g18230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GI99]

Coordinates

chrLK032168:-:189288..190745

Molecular Weight (calculated)

51649.3 Da

IEP (calculated)

8.524

GRAVY (calculated)

0.072

Length

485 amino acids

Sequence
(BLAST)

001: MGQNVPKTVI FTAAVLFSSF SSVSSSFQYN TLIVNTLPSS QIFSSPEPGS LTSTVFDSIT SLTVHLSHVD ALSSFSDASP LELFNLRLRR DSLRVKSLTT
101: LAAVSTGKNV TKRTPRSPGG FSGAVISGLS QGSGEYFMRL GVGTPATNVY MVLDTGSDVV WLQCSPCKVC YNQSDPMFNP AKSTTFATVP CGSSLCRRLD
201: ESSSECVNRG SKTCLYQVSY GDGSFTMGDF STETLTFHGA RVDHVALGCG HDNEGLFVGA AGLLGLGRGG LSFPSQTKNR YNAKFSYCFV DRTSSGSASK
301: PPSTIVFGND AVRETSVFTT LLTNPKLDTF YYLQLLGISV GGSRVRGVSE SQFKLDPTGD GGVIIDSGTS VTRLTRPAYV AFRDAFLLGA TRLKRAPSYS
401: LFDTCFDLSG MTTVKVPTVV FHFSGGDVSL PASNYLIPVN TQGRFCFAFA STMGSLSIIG NIQQQGFRVA YDLVGSRVGF MSGAC

Best Arabidopsis Sequence Match ( AT3G61820.1 )
(BLAST)

001: MERKVLNTLA FSVFAVLFFT SSASSQYQTL VVNTLPSSAT LSWPESESLT DESLSESTTS LSVHLSHVDA LSSFSDASPA DLFNLRLQRD SLRVKSITSL
101: AAVSTGRNAT KRTPRTAGGF SGAVISGLSQ GSGEYFMRLG VGTPATNVYM VLDTGSDVVW LQCSPCKACY NQTDAIFDPK KSKTFATVPC GSRLCRRLDD
201: SSECVTRRSK TCLYQVSYGD GSFTEGDFST ETLTFHGARV DHVPLGCGHD NEGLFVGAAG LLGLGRGGLS FPSQTKNRYN GKFSYCLVDR TSSGSSSKPP
301: STIVFGNAAV PKTSVFTPLL TNPKLDTFYY LQLLGISVGG SRVPGVSESQ FKLDATGNGG VIIDSGTSVT RLTQPAYVAL RDAFRLGATK LKRAPSYSLF
401: DTCFDLSGMT TVKVPTVVFH FGGGEVSLPA SNYLIPVNTE GRFCFAFAGT MGSLSIIGNI QQQGFRVAYD LVGSRVGFLS RAC

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9M356]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.