Factsheet for HORVU3Hr1G052320.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, vacuole

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane, plastid, vacuole
Any Predictor:	mitochondrion, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G028680.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01300.1	HORVU6Hr1G028680.1	AT4G31920.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G214100.1	Wheat	nucleus	94.05	97.13
TraesCS3D01G216700.1	Wheat	vacuole	92.86	95.71
TraesCS3B01G244800.1	Wheat	plastid	95.44	90.93
Os01t0598600-01	Rice	nucleus	81.55	82.2
Zm00001d044390_P001	Maize	plasma membrane	77.38	80.41
EES01017	Sorghum	mitochondrion, plastid	79.17	77.03
Solyc01g096040.2.1	Tomato	nucleus, plastid	55.75	58.42
PGSC0003DMT400000651	Potato	vacuole	55.56	58.33
KRH68920	Soybean	nucleus	52.58	57.48
KRG97194	Soybean	endoplasmic reticulum	53.57	57.2
KRH47900	Soybean	nucleus	53.37	56.87
KRH06457	Soybean	endoplasmic reticulum, vacuole	52.98	56.09
Bra033271.1-P	Field mustard	vacuole	53.37	55.93
CDX90023	Canola	vacuole	53.37	55.93
KXG24092	Sorghum	vacuole	54.56	55.89
VIT_15s0046g00360.t01	Wine grape	extracellular	54.17	55.83
CDY15187	Canola	vacuole	53.17	55.72
EES16428	Sorghum	extracellular	54.56	55.67
OQU92922	Sorghum	vacuole	53.57	55.1
Solyc10g009410.1.1	Tomato	extracellular	49.8	54.8
CDY43952	Canola	vacuole	52.38	54.66
AT1G01300.1	Thale cress	vacuole	52.58	54.64
KXG24090	Sorghum	extracellular	53.57	54.55
OQU79707	Sorghum	vacuole	54.37	54.47
CDX89133	Canola	vacuole	52.18	54.45
Bra014420.1-P	Field mustard	vacuole	52.18	54.45
CDX67868	Canola	vacuole	51.59	53.61
GSMUA_Achr3P31640_001	Banana	cytosol	59.72	53.56
AT3G61820.1	Thale cress	extracellular, vacuole	51.19	53.42
PGSC0003DMT400048585	Potato	vacuole	48.81	53.36
Bra003476.1-P	Field mustard	vacuole	51.19	53.2
CDY25081	Canola	vacuole	50.2	52.16
HORVU3Hr1G068330.1	Barley	plastid, vacuole	40.87	46.71
HORVU3Hr1G009980.3	Barley	plastid	45.24	43.59
HORVU6Hr1G071390.1	Barley	mitochondrion, plastid	7.94	39.22
HORVU6Hr1G071280.1	Barley	plastid	13.89	36.65
HORVU6Hr1G071270.5	Barley	plastid	30.36	36.0
HORVU0Hr1G016890.2	Barley	plastid	31.35	33.83
HORVU5Hr1G072370.1	Barley	mitochondrion, vacuole	31.75	33.06
HORVU6Hr1G071190.2	Barley	endoplasmic reticulum, vacuole	29.76	33.04
HORVU6Hr1G071160.1	Barley	vacuole	29.17	32.24
HORVU7Hr1G045670.1	Barley	vacuole	29.37	32.17
HORVU7Hr1G116780.2	Barley	plastid	34.52	31.93
HORVU7Hr1G094870.4	Barley	plastid	33.33	31.88
HORVU7Hr1G109750.4	Barley	plastid	29.56	30.85
HORVU7Hr1G109730.1	Barley	plasma membrane	30.16	30.28
HORVU5Hr1G064080.3	Barley	endoplasmic reticulum, golgi	27.78	30.17
HORVU5Hr1G093290.1	Barley	mitochondrion, vacuole	30.16	29.63
HORVU7Hr1G045580.8	Barley	endoplasmic reticulum	26.79	29.41
HORVU7Hr1G009410.1	Barley	endoplasmic reticulum, vacuole	28.17	28.74
HORVU7Hr1G009420.4	Barley	endoplasmic reticulum, vacuole	27.98	28.54
HORVU7Hr1G036020.1	Barley	extracellular, plasma membrane, vacuole	27.58	28.31
HORVU7Hr1G009380.1	Barley	vacuole	27.78	28.28
HORVU6Hr1G071210.4	Barley	vacuole	25.79	27.48
HORVU7Hr1G116810.1	Barley	plastid	18.85	26.69
HORVU7Hr1G009260.2	Barley	endoplasmic reticulum	23.61	24.9

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	UniProt:A0A287L1U3	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	InterPro:CND41-like
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G052320	EnsemblPlants:HORVU3Hr1G052320.1	InterPro:IPR021109
InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF355	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM
InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI000B482E2B	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:+:379532735..379534528

Molecular Weight (calculated)

52309.1 Da

IEP (calculated)

8.886

GRAVY (calculated)

0.023

Length

504 amino acids

Sequence
(BLAST)

001: RGPPHLQFTP PHMPMAPPPL LPLSALLLLL AAASNASAKP VQTQALLATP LSPDRVSAPS ELARDDDDSV FAGNLASAED APASTVRFRL VHRDDFSVNA
101: TAAELLAYRL ERDAKRAARL SAAAGPANGT RRGGGGVVAP VVSGLAQGSG EYFTKIGVGT PATPALMVLD TGSDVVWLQC APCRRCYEQS GQVFDPRRSR
201: SYNAVGCAAP LCRRLDSGGC DLRRSACLYQ VAYGDGSVTA GDFATETLTF AGGARVARVA LGCGHDNEGL FVAAAGLLGL GRGSLSFPTQ ISRRYGRSFS
301: YCLVDRTSSA NTASRSSTVT FGSGAVGSTV ASSFTPMVKN PRMETFYYVQ LIGISVGGAR VPGVANSDLR LDPSSGRGGV IVDSGTSVTR LARPAYSALR
401: DAFRGAAAGL RLSPGGFSLF DTCYDLSGRK VVKVPTVSMH FAGGAEAALP PENYLIPVDS KGTFCFAFAG TDGGVSIIGN IQQQGFRVVF DGDGQRVAFT
501: PKGC

Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)

001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA

Arabidopsis Description

APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.