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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G222800.1 Wheat unclear 82.35 82.35
TraesCS7B01G128000.1 Wheat plasma membrane, vacuole 79.96 81.37
TraesCS7A01G219300.1 Wheat endoplasmic reticulum 81.05 80.17
HORVU6Hr1G071390.1 Barley mitochondrion, plastid 15.9 71.57
OQU76291 Sorghum vacuole 70.37 68.72
HORVU6Hr1G071280.1 Barley plastid 28.32 68.06
Os06t0304600-02 Rice endoplasmic reticulum, vacuole 69.5 68.02
Zm00001d045836_P001 Maize extracellular 69.06 67.3
HORVU6Hr1G071270.5 Barley plastid 56.43 60.94
GSMUA_Achr5P22390_001 Banana plastid 40.3 57.28
GSMUA_Achr10P... Banana vacuole 46.84 53.22
GSMUA_Achr3P10950_001 Banana vacuole 51.2 50.32
VIT_00s1206g00010.t01 Wine grape plastid 32.68 45.87
HORVU6Hr1G071210.4 Barley vacuole 45.53 44.19
GSMUA_Achr6P36260_001 Banana plasma membrane, vacuole 51.2 42.5
KRH11684 Soybean vacuole 40.3 39.19
KRH36688 Soybean mitochondrion, vacuole 40.52 38.35
VIT_00s0429g00040.t01 Wine grape extracellular 24.62 38.18
HORVU5Hr1G072370.1 Barley mitochondrion, vacuole 35.73 33.88
HORVU6Hr1G071190.2 Barley endoplasmic reticulum, vacuole 30.5 30.84
HORVU7Hr1G109730.1 Barley plasma membrane 32.68 29.88
HORVU6Hr1G071160.1 Barley vacuole 29.19 29.39
HORVU5Hr1G064080.3 Barley endoplasmic reticulum, golgi 29.63 29.31
HORVU7Hr1G045670.1 Barley vacuole 29.19 29.13
HORVU3Hr1G068330.1 Barley plastid, vacuole 27.89 29.02
HORVU0Hr1G016890.2 Barley plastid 28.98 28.48
HORVU5Hr1G093290.1 Barley mitochondrion, vacuole 31.59 28.27
HORVU7Hr1G109750.4 Barley plastid 29.41 27.95
HORVU7Hr1G094870.4 Barley plastid 31.81 27.7
HORVU3Hr1G052320.1 Barley mitochondrion, plasma membrane, plastid, vacuole 29.41 26.79
HORVU7Hr1G009410.1 Barley endoplasmic reticulum, vacuole 27.23 25.3
HORVU7Hr1G009420.4 Barley endoplasmic reticulum, vacuole 27.02 25.1
HORVU7Hr1G009380.1 Barley vacuole 27.02 25.05
HORVU3Hr1G009980.3 Barley plastid 28.54 25.05
HORVU7Hr1G036020.1 Barley extracellular, plasma membrane, vacuole 26.36 24.64
HORVU7Hr1G116780.2 Barley plastid 25.71 21.65
HORVU7Hr1G009260.2 Barley endoplasmic reticulum 22.44 21.55
HORVU7Hr1G116810.1 Barley plastid 13.07 16.85
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10UniProt:A0A287WBF1InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_ASGO:GO:0003674
GO:GO:0003824GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233
GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:HORVU7Hr1G045580EnsemblPlants:HORVU7Hr1G045580.8InterPro:IPR021109InterPro:IPR033121
InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PRINTS:PR00792ScanProsite:PS00141PFscan:PS51767
PANTHER:PTHR13683PANTHER:PTHR13683:SF329InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_C
InterPro:TAXi_NUniParc:UPI000B47D1C3SEG:seg:::
Description
No Description!
Coordinates
chrchr7H:-:144290166..144293138
Molecular Weight (calculated)
42420.3 Da
IEP (calculated)
6.484
GRAVY (calculated)
0.218
Length
459 amino acids
Sequence
(BLAST)
001: MELLHLLLAC SLLFPLAAPA REITSACPSQ ANDFQHVNGT GMHLTLHHSQ SPCSPAPLPS ALPFSAVIAH DDARIARLSV RLAKTPSSRP TSLRQSTGVP
101: NLADSMATSV PLAPGASVGV GNYVTQLGLG TPATTYAMVV DTGSSLTWLQ CSPCVVSCHR QAGPLYNPRA SGTYAAVPCS APQCGELQAA TLNPSACSTS
201: GVCIYQASYG DSSFSIGYLS RDTVSFGSGR FPGFYYGXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXAGYLSIG PYNPGQYSYT
301: PMVSSSLDAS LYFISLASMS VAGSTLAVSP SEYGSLPTII DSGTVITRLP TAVYTALSKA LGAAMGGAPR APAYSILDTC FKGQASELHV PAVDMAFAGG
401: ATLKLAPGNV LIDVDESTTC LAFAATDSTA IIGNTQQQTF SIVYDVAQSR IGFAAGGCS
Best Arabidopsis Sequence Match ( AT1G79720.1 )
(BLAST)
001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV
Arabidopsis Description
At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.