Factsheet for VIT_00s0429g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1206g00010.t01	Wine grape	plastid	55.07	49.85
KRH11684	Soybean	vacuole	58.45	36.65
KRH36688	Soybean	mitochondrion, vacuole	56.76	34.64
GSMUA_Achr10P...	Banana	vacuole	45.27	33.17
OQU76291	Sorghum	vacuole	48.65	30.64
Zm00001d017866_P002	Maize	extracellular	48.31	30.62
Zm00001d045836_P001	Maize	extracellular	48.65	30.57
EES07349	Sorghum	vacuole	47.3	30.57
Zm00001d017869_P001	Maize	plasma membrane	47.97	30.54
Os06t0304600-02	Rice	endoplasmic reticulum, vacuole	47.97	30.28
TraesCS7B01G128000.1	Wheat	plasma membrane, vacuole	45.61	29.93
TraesCS7D01G222800.1	Wheat	unclear	46.28	29.85
Os02t0720900-01	Rice	nucleus	45.61	29.48
GSMUA_Achr3P10950_001	Banana	vacuole	45.95	29.12
TraesCS7A01G219300.1	Wheat	endoplasmic reticulum	45.27	28.88
GSMUA_Achr5P22390_001	Banana	plastid	31.08	28.48
HORVU6Hr1G071270.5	Barley	plastid	40.88	28.47
TraesCS6A01G283700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.93	28.18
TraesCS6B01G312000.2	Wheat	endoplasmic reticulum, extracellular, vacuole	44.59	28.03
TraesCS6D01G264200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	44.59	28.03
VIT_04s0008g07080.t01	Wine grape	extracellular	37.16	25.46
HORVU6Hr1G071210.4	Barley	vacuole	40.2	25.16
HORVU7Hr1G045580.8	Barley	endoplasmic reticulum	38.18	24.62
GSMUA_Achr6P36260_001	Banana	plasma membrane, vacuole	45.95	24.59
VIT_04s0008g07110.t01	Wine grape	extracellular	36.82	22.66
VIT_01s0011g03210.t01	Wine grape	extracellular, vacuole	32.77	19.76
VIT_09s0018g01670.t01	Wine grape	vacuole	31.42	19.54
VIT_10s0071g00770.t01	Wine grape	extracellular	30.07	18.58
VIT_17s0000g03990.t01	Wine grape	endoplasmic reticulum, plasma membrane	30.41	18.15
VIT_15s0046g00360.t01	Wine grape	extracellular	29.39	17.79
VIT_12s0028g00610.t01	Wine grape	extracellular	28.04	15.2
HORVU6Hr1G071280.1	Barley	plastid	5.07	7.85
HORVU6Hr1G071390.1	Barley	mitochondrion, plastid	0.0	0.0

Protein Annotations

EntrezGene:100263804	wikigene:100263804	MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.050	InterPro:Aspartic_peptidase_A1
InterPro:Aspartic_peptidase_AS	ProteinID:CCB52432	ProteinID:CCB52432.1	UniProt:F6HJJ7	EMBL:FN595779	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	EntrezGene:LOC100263804
wikigene:LOC100263804	InterPro:PEPTIDASE_A1	PFAM:PF14543	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF422	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_N	UniParc:UPI0002108DE6
ArrayExpress:VIT_00s0429g00040	EnsemblPlantsGene:VIT_00s0429g00040	EnsemblPlants:VIT_00s0429g00040.t01	RefSeq:XP_002277380	RefSeq:XP_002277380.2	SEG:seg

Description

No Description!

Coordinates

chrUn:+:28781371..28782415

Molecular Weight (calculated)

31516.5 Da

IEP (calculated)

8.737

GRAVY (calculated)

0.016

Length

296 amino acids

Sequence
(BLAST)

001: MGLVWFLGWF YLLATASSFV EKENEAVALG PRVNQSGGVV QMTIHHVHGP GSSLAPQPPV SFSDVLAWDD ARVKTLNSRL TRKDTRFPKS VLTKKDIRFP
101: KSVSVPLNPG ASIGSGNYYV KVGFGSPARY YSMIVDTGSS LSWLQCKPCV VYCHVQADPL FDPSASKTYK SLSCTSSQCS SLVDATLNNP LCETSSNVCV
201: YTASYGDSSY SMGYLSQDLL TLAPSQTLPG FVYGCGQDSD GLFGRAAGIL GLGRNKLSML GQVSSKFGYA FSYCLPTRGG GGFLSIGKAS LAGSAY

Best Arabidopsis Sequence Match ( AT5G10770.1 )
(BLAST)

001: MSINRNLLNI IIILCICLNL GCNDGAQERE TDSHTIQVSS LLPSSSSSCV LSPRASTTKS SLHVTHRHGT CSRLNNGKAT SPDHVEILRL DQARVNSIHS
101: KLSKKLATDH VSESKSTDLP AKDGSTLGSG NYIVTVGLGT PKNDLSLIFD TGSDLTWTQC QPCVRTCYDQ KEPIFNPSKS TSYYNVSCSS AACGSLSSAT
201: GNAGSCSASN CIYGIQYGDQ SFSVGFLAKE KFTLTNSDVF DGVYFGCGEN NQGLFTGVAG LLGLGRDKLS FPSQTATAYN KIFSYCLPSS ASYTGHLTFG
301: SAGISRSVKF TPISTITDGT SFYGLNIVAI TVGGQKLPIP STVFSTPGAL IDSGTVITRL PPKAYAALRS SFKAKMSKYP TTSGVSILDT CFDLSGFKTV
401: TIPKVAFSFS GGAVVELGSK GIFYVFKISQ VCLAFAGNSD DSNAAIFGNV QQQTLEVVYD GAGGRVGFAP NGCS

Arabidopsis Description

Aspartyl protease family protein At5g10770 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.