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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
nucleus: 19621931
msms PMID: 19621931 doi
T Aki, S Yanagisawa
Department of Applied Biological Chemistry, The University of Tokyo, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G071280.1 Barley plastid 35.81 85.86
HORVU6Hr1G071390.1 Barley mitochondrion, plastid 19.0 85.29
EES07349 Sorghum vacuole 84.93 84.93
Zm00001d017869_P001 Maize plasma membrane 84.28 83.01
Zm00001d017866_P002 Maize extracellular 83.84 82.23
TraesCS6D01G264200.1 Wheat endoplasmic reticulum, extracellular, vacuole 82.75 80.47
HORVU6Hr1G071270.5 Barley plastid 74.24 80.0
TraesCS6B01G312000.2 Wheat endoplasmic reticulum, extracellular, vacuole 82.1 79.83
TraesCS6A01G283700.1 Wheat endoplasmic reticulum, extracellular, vacuole 82.1 79.66
Os06t0304600-02 Rice endoplasmic reticulum, vacuole 74.45 72.71
GSMUA_Achr5P22390_001 Banana plastid 49.34 69.97
GSMUA_Achr10P... Banana vacuole 56.11 63.61
GSMUA_Achr3P10950_001 Banana vacuole 62.01 60.81
HORVU6Hr1G071210.4 Barley vacuole 60.26 58.35
VIT_00s1206g00010.t01 Wine grape plastid 38.21 53.52
GSMUA_Achr6P36260_001 Banana plasma membrane, vacuole 61.79 51.18
VIT_00s0429g00040.t01 Wine grape extracellular 29.48 45.61
KRH11684 Soybean vacuole 46.72 45.34
KRH36688 Soybean mitochondrion, vacuole 46.29 43.71
Os09t0482500-01 Rice extracellular 40.17 37.94
Os09t0482200-01 Rice plasma membrane, vacuole 40.17 37.94
Os02t0720600-01 Rice extracellular 36.46 36.07
Os06t0610800-01 Rice nucleus, plastid 39.3 34.68
Os09t0423500-01 Rice endoplasmic reticulum, vacuole 34.72 33.62
Os01t0720000-00 Rice vacuole 32.53 33.41
Os06t0118000-01 Rice cytosol, peroxisome 18.56 32.82
Os08t0267300-00 Rice plasma membrane, vacuole 37.34 32.63
Os05t0590000-01 Rice extracellular 33.19 31.6
Os01t0598600-01 Rice nucleus 34.5 31.6
Os01t0140100-01 Rice plastid 34.72 31.55
Os06t0306500-00 Rice plasma membrane, vacuole 26.86 31.06
Os06t0119600-01 Rice nucleus 32.53 30.1
Os06t0121800-00 Rice endoplasmic reticulum, plasma membrane 30.13 28.22
Os02t0314600-01 Rice extracellular 30.57 27.24
Os06t0121500-01 Rice endoplasmic reticulum, extracellular 25.98 26.92
Os06t0118700-02 Rice extracellular 27.51 25.51
Os04t0677100-00 Rice vacuole 20.74 19.04
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:4330554MEROPS:A01.050EMBL:AK061628InterPro:Aspartic_peptidase_A1
InterPro:Aspartic_peptidase_ASProteinID:BAD12879.1ProteinID:BAD12999.1ProteinID:BAF09870.1ProteinID:BAS80647.1GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0003824GO:GO:0004190GO:GO:0005488GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0016787GO:GO:0019538
GO:GO:0030163InterPro:IPR021109InterPro:IPR033121EnsemblPlantsGene:Os02g0720900EnsemblPlants:Os02t0720900-01InterPro:PEPTIDASE_A1
PFAM:PF14541PFAM:PF14543PRINTS:PR00792ScanProsite:PS00141PFscan:PS51767PANTHER:PTHR13683
PANTHER:PTHR13683:SF329InterPro:Peptidase_aspartic_dom_sfUniProt:Q6Z671SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_C
InterPro:TAXi_NUniParc:UPI00003503ACRefSeq:XP_015626129.1SEG:seg::
Description
Peptidase A1 domain containing protein. (Os02t0720900-01);Hypothetical protein. (Os02t0720900-02);Similar to Aspartic proteinase nepenthesin-1. (Os02t0720900-04)
Coordinates
chr2:+:29911311..29916314
Molecular Weight (calculated)
47418.0 Da
IEP (calculated)
7.554
GRAVY (calculated)
0.197
Length
458 amino acids
Sequence
(BLAST)
001: MALHLLHLLA FSLLFAVATP IRDITDVCSS QIKDFQYLNS TGLHLELHHP RSPCSPAPVP ADLPFTAVLT HDDARISSLA ARLAKTPSAR ATSLDADADA
101: GLAGSLASVP LSPGASVGVG NYVTRMGLGT PATQYVMVVD TGSSLTWLQC SPCLVSCHRQ SGPVFNPKSS STYASVGCSA QQCSDLPSAT LNPSACSSSN
201: VCIYQASYGD SSFSVGYLSK DTVSFGSTSL PNFYYGCGQD NEGLFGRSAG LIGLARNKLS LLYQLAPSLG YSFTYCLPSS SSSGYLSLGS YNPGQYSYTP
301: MVSSSLDDSL YFIKLSGMTV AGNPLSVSSS AYSSLPTIID SGTVITRLPT SVYSALSKAV AAAMKGTSRA SAYSILDTCF KGQASRVSAP AVTMSFAGGA
401: ALKLSAQNLL VDVDDSTTCL AFAPARSAAI IGNTQQQTFS VVYDVKSSRI GFAAGGCS
Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.