Factsheet for TraesCS6B01G312000.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G264200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	98.51	98.51
TraesCS6A01G283700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	98.09	97.88
HORVU6Hr1G071390.1	Barley	mitochondrion, plastid	21.02	97.06
HORVU6Hr1G071280.1	Barley	plastid	38.85	95.81
HORVU6Hr1G071270.5	Barley	plastid	85.14	94.35
Os02t0720900-01	Rice	nucleus	79.83	82.1
EES07349	Sorghum	vacuole	78.98	81.22
Zm00001d017869_P001	Maize	plasma membrane	78.77	79.78
Zm00001d017866_P002	Maize	extracellular	78.34	79.02
TraesCS7B01G128000.1	Wheat	plasma membrane, vacuole	67.3	70.29
GSMUA_Achr5P22390_001	Banana	plastid	47.35	69.04
HORVU6Hr1G071210.4	Barley	vacuole	67.73	67.44
GSMUA_Achr10P...	Banana	vacuole	51.59	60.15
GSMUA_Achr3P10950_001	Banana	vacuole	57.32	57.82
VIT_00s1206g00010.t01	Wine grape	plastid	36.52	52.6
GSMUA_Achr6P36260_001	Banana	plasma membrane, vacuole	57.75	49.19
KRH11684	Soybean	vacuole	45.44	45.34
VIT_00s0429g00040.t01	Wine grape	extracellular	28.03	44.59
KRH36688	Soybean	mitochondrion, vacuole	45.01	43.71
TraesCS7B01G392500.1	Wheat	plastid	28.45	42.14
TraesCS5B01G258200.1	Wheat	plastid, vacuole	38.85	37.97
TraesCS7B01G392400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.94	37.83
TraesCS7B01G305000.1	Wheat	plastid	38.85	37.04
TraesCS7B01G392300.1	Wheat	extracellular	24.42	36.16
TraesCS3B01G064700.1	Wheat	endoplasmic reticulum, vacuole	36.94	34.59
TraesCS5B01G220700.1	Wheat	endoplasmic reticulum	33.55	34.35
TraesCS6B01G312200.1	Wheat	endoplasmic reticulum, vacuole	32.27	33.55
TraesCS7B01G129200.1	Wheat	vacuole	32.48	32.76
TraesCS3B01G322500.1	Wheat	vacuole	30.57	32.51
TraesCS2B01G590400.1	Wheat	extracellular	32.06	31.79
TraesCS2B01G590200.1	Wheat	extracellular, vacuole	32.06	31.66
TraesCS7B01G090800.1	Wheat	vacuole	31.85	31.51
TraesCS6B01G312300.1	Wheat	extracellular, vacuole	27.39	30.57
TraesCS7B01G090900.1	Wheat	vacuole	30.57	30.25
TraesCS3B01G244800.1	Wheat	plastid	33.97	30.25
TraesCS5B01G379900.1	Wheat	mitochondrion	35.88	30.18
TraesCS7B01G079000.1	Wheat	extracellular, plasma membrane, vacuole	30.57	29.45
TraesCS7B01G128600.1	Wheat	plastid	28.87	29.25
TraesCS7B01G444800.1	Wheat	vacuole	29.72	28.34
TraesCS7B01G445000.1	Wheat	vacuole	30.15	28.06

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792
ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF329	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	EnsemblPlantsGene:TraesCS6B01G312000	EnsemblPlants:TraesCS6B01G312000.2	SEG:seg

Description

No Description!

Coordinates

chr6B:-:559038673..559042692

Molecular Weight (calculated)

48940.9 Da

IEP (calculated)

7.916

GRAVY (calculated)

0.149

Length

471 amino acids

Sequence
(BLAST)

001: MAPASLPLLV AAFSLLFAAA TPIRDVADAC SSQVQAADFE HLNSTAMHLP LHHSRGPCSP VSVPSDLPFS AVLTHDDARI ASLAARLAKA PSSSTARPMV
101: TVASLYRAND KVDGVAASLA SVPLTPGTSY GVGNYVTRMG LGTPAKPYIM VVDTGSSLTW LQCSPCRVSC HRQSGPVFDP KTSSSYAAVS CSTPQCNDLS
201: TATLNPAACS SSDVCIYQAS YGDSSFSVGY LSKDTVSFGS NSVPNFYYGC GQDNEGLFGR SAGLMGLARN KLSLLYQLAP TLGYSFSYCL PSSSSSGYLS
301: IGSYNPGQYS YTPMVSSTLD DSLYFIKLSG MTVAGKPLAI SSSEYSSLPT IIDSGTVITR LPTTVYDSLS KAVAGAMKGT KRADAYSILD TCFVGQASSL
401: RVPAVSMGFS GGAALKLSAQ NLLVDVDSST TCLAFAPARS AAIIGNTQQQ TFSVVYDVKS NRIGFAAGGC R

Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)

001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA

Arabidopsis Description

APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.