Factsheet for TraesCS6B01G312200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G264000.2	Wheat	unclear	94.7	94.7
TraesCS6A01G283500.1	Wheat	unclear	94.48	93.45
TraesCS2D01G569500.1	Wheat	plastid	60.93	92.31
HORVU6Hr1G071190.2	Barley	endoplasmic reticulum, vacuole	86.53	86.34
Os02t0720600-01	Rice	extracellular	65.12	63.71
TraesCS7B01G392500.1	Wheat	plastid	44.59	63.52
TraesCS7B01G392300.1	Wheat	extracellular	43.05	61.32
TraesCS7B01G392400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	62.25	61.3
TraesCS6B01G312300.1	Wheat	extracellular, vacuole	54.08	58.06
TraesCS7B01G129200.1	Wheat	vacuole	47.02	45.61
GSMUA_Achr3P04040_001	Banana	mitochondrion	37.09	44.8
GSMUA_Achr3P04020_001	Banana	vacuole	37.97	43.43
TraesCS7B01G090900.1	Wheat	vacuole	44.81	42.65
GSMUA_Achr3P04060_001	Banana	vacuole	37.31	42.46
TraesCS7B01G090800.1	Wheat	vacuole	43.71	41.6
TraesCS7B01G305000.1	Wheat	plastid	45.25	41.5
TraesCS7B01G079000.1	Wheat	extracellular, plasma membrane, vacuole	44.37	41.1
TraesCS5B01G258200.1	Wheat	plastid, vacuole	42.38	39.83
VIT_04s0008g07080.t01	Wine grape	extracellular	37.31	39.12
VIT_04s0008g07110.t01	Wine grape	extracellular	40.18	37.84
CDX85746	Canola	vacuole	39.29	37.32
CDY40117	Canola	extracellular, vacuole	39.29	37.32
Bra028568.1-P	Field mustard	vacuole	39.29	37.32
PGSC0003DMT400059566	Potato	extracellular	38.63	36.08
AT5G10770.1	Thale cress	vacuole	37.75	36.08
CDX69804	Canola	vacuole	37.75	35.92
KRG98688	Soybean	nucleus	38.63	35.71
KRH46246	Soybean	cytosol	24.5	35.69
KRH46241	Soybean	nucleus, vacuole	38.19	35.45
KRH46245	Soybean	nucleus	37.53	35.27
CDX97055	Canola	cytosol, plastid, vacuole	32.45	35.08
CDX97058	Canola	cytosol, extracellular, nucleus	37.97	35.03
Solyc08g067100.2.1	Tomato	extracellular, plastid	38.63	34.93
KRH46242	Soybean	vacuole	37.31	34.85
TraesCS7B01G128000.1	Wheat	plasma membrane, vacuole	34.66	34.81
AT5G10760.1	Thale cress	vacuole	35.32	34.48
CDX97054	Canola	extracellular, plastid, vacuole	35.98	34.46
KRH73276	Soybean	cytosol	30.91	34.23
TraesCS5B01G220700.1	Wheat	endoplasmic reticulum	34.44	33.91
CDY70207	Canola	plastid, vacuole	35.32	33.9
KRH73277	Soybean	extracellular	34.0	33.41
CDY40116	Canola	extracellular	34.66	32.78
CDX85747	Canola	extracellular, vacuole	34.44	32.64
Bra028569.1-P	Field mustard	extracellular	34.22	32.43
TraesCS6B01G312000.2	Wheat	endoplasmic reticulum, extracellular, vacuole	33.55	32.27
TraesCS7B01G128600.1	Wheat	plastid	32.89	32.04
TraesCS2B01G590400.1	Wheat	extracellular	33.33	31.79
Bra009007.1-P	Field mustard	plastid, vacuole	30.46	31.72
CDY72573	Canola	plastid, vacuole	30.24	31.49
TraesCS2B01G590200.1	Wheat	extracellular, vacuole	33.11	31.45
TraesCS3B01G064700.1	Wheat	endoplasmic reticulum, vacuole	34.66	31.21
KRH73176	Soybean	extracellular, vacuole	31.57	30.95
TraesCS3B01G322500.1	Wheat	vacuole	28.48	29.12
TraesCS5B01G379900.1	Wheat	mitochondrion	35.54	28.75
TraesCS7B01G445000.1	Wheat	vacuole	31.13	27.87
TraesCS7B01G444800.1	Wheat	vacuole	29.8	27.33
TraesCS3B01G244800.1	Wheat	plastid	31.79	27.22
CDX69805	Canola	cytosol	32.67	25.96
Bra009006.1-P	Field mustard	plasma membrane, plastid, vacuole	37.53	16.6
GSMUA_Achr3P04070_001	Banana	nucleus	41.94	15.52

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109
InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF290	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G312200	EnsemblPlants:TraesCS6B01G312200.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:+:559355454..559357229

Molecular Weight (calculated)

47394.8 Da

IEP (calculated)

4.838

GRAVY (calculated)

-0.085

Length

453 amino acids

Sequence
(BLAST)

001: MAFVSQLLLV LSCIICHVLI AGAASEQSYK IFSTSSLKPQ AVCSDPKVNP SSSSGATVPL NHRHGPCSPA PSKKEPAFEE LLRRDQLRAG YVQRKFSKNH
101: RGGGLQQSEE LKVPTELGSS LDTLEYVITV GVGSPAVQQT MTMDTGSDVS WVHCNSNSTA GSTPFDPAKS STYSPFLCGA AACTQLGAEA NTCSNSECQY
201: MVRYGDGSNT TGTYGSDTLA LGSDTVKDFQ FGCSRVEEGF GDKTDGLMGL GGDAQSLISQ TAAKYGRAFS YCLPPSPGSK GFLTLGAQTG TTGFATTGML
301: RSEQAPTFYG VLLQGIKVGG EQLSVAPSVF SAGSVMDSGT IITRLPPTAY TALKTAFKDG MKQYPPAPSR SILDTCFDFS GQDNVSIPTV ALVFDGGAVV
401: DLDANGIIFG SCLAFTGTDD DESTGIIGNV QQRTLEVLYD VGQSVFGFKP SAC

Best Arabidopsis Sequence Match ( AT1G79720.1 )
(BLAST)

001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV

Arabidopsis Description

At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.