Factsheet for TraesCS3B01G322500.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G146200.3
TraesCS6B01G174400.1
TraesCS6D01G135500.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01300.1	TraesCS6A01G146200.3	AT4G31920.1	18642946
AT1G01300.1	TraesCS6B01G174400.1	AT4G31920.1	18642946
AT1G01300.1	TraesCS6D01G135500.3	AT4G31920.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G287800.1	Wheat	cytosol	75.39	93.56
TraesCS3D01G287600.1	Wheat	vacuole	93.91	93.06
HORVU3Hr1G068330.1	Barley	plastid, vacuole	88.26	88.66
Os01t0720000-00	Rice	vacuole	66.14	65.7
KXG33265	Sorghum	vacuole	62.75	61.1
Zm00001d043617_P001	Maize	endoplasmic reticulum, extracellular, vacuole	60.72	59.51
KRH47900	Soybean	nucleus	42.21	39.53
Solyc10g009410.1.1	Tomato	extracellular	40.86	39.52
KRH06457	Soybean	endoplasmic reticulum, vacuole	42.44	39.5
Solyc01g096040.2.1	Tomato	nucleus, plastid	42.66	39.29
PGSC0003DMT400000651	Potato	vacuole	42.21	38.96
CDY15187	Canola	vacuole	42.21	38.88
PGSC0003DMT400048585	Potato	vacuole	40.41	38.83
Bra033271.1-P	Field mustard	vacuole	41.99	38.67
CDX90023	Canola	vacuole	41.99	38.67
KRH68920	Soybean	nucleus	39.95	38.39
TraesCS3B01G244800.1	Wheat	plastid	45.6	38.19
AT1G01300.1	Thale cress	vacuole	41.76	38.14
KRG97194	Soybean	endoplasmic reticulum	40.63	38.14
CDY43952	Canola	vacuole	40.86	37.47
VIT_15s0046g00360.t01	Wine grape	extracellular	41.31	37.42
Bra014420.1-P	Field mustard	vacuole	40.63	37.27
CDX89133	Canola	vacuole	40.41	37.06
TraesCS7B01G392500.1	Wheat	plastid	26.19	36.48
AT3G61820.1	Thale cress	extracellular, vacuole	39.73	36.44
CDX67868	Canola	vacuole	39.73	36.29
Bra003476.1-P	Field mustard	vacuole	39.5	36.08
TraesCS2B01G590200.1	Wheat	extracellular, vacuole	38.83	36.06
TraesCS2B01G590400.1	Wheat	extracellular	38.37	35.79
CDY25081	Canola	vacuole	38.83	35.46
TraesCS3B01G064700.1	Wheat	endoplasmic reticulum, vacuole	40.18	35.39
TraesCS7B01G128000.1	Wheat	plasma membrane, vacuole	34.31	33.7
GSMUA_Achr3P31640_001	Banana	cytosol	41.08	32.38
TraesCS6B01G312000.2	Wheat	endoplasmic reticulum, extracellular, vacuole	32.51	30.57
TraesCS7B01G392400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	31.38	30.22
TraesCS5B01G258200.1	Wheat	plastid, vacuole	32.73	30.08
TraesCS7B01G444800.1	Wheat	vacuole	33.18	29.76
TraesCS7B01G445000.1	Wheat	vacuole	33.86	29.64
TraesCS5B01G220700.1	Wheat	endoplasmic reticulum	30.7	29.57
TraesCS7B01G305000.1	Wheat	plastid	32.05	28.74
TraesCS6B01G312200.1	Wheat	endoplasmic reticulum, vacuole	29.12	28.48
TraesCS7B01G090800.1	Wheat	vacuole	30.47	28.36
TraesCS7B01G090900.1	Wheat	vacuole	30.02	27.94
TraesCS7B01G129200.1	Wheat	vacuole	29.12	27.62
TraesCS7B01G392300.1	Wheat	extracellular	19.64	27.36
TraesCS6B01G312300.1	Wheat	extracellular, vacuole	25.28	26.54
TraesCS7B01G128600.1	Wheat	plastid	26.64	25.38
TraesCS5B01G379900.1	Wheat	mitochondrion	31.83	25.18
TraesCS7B01G079000.1	Wheat	extracellular, plasma membrane, vacuole	27.09	24.54

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109
InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF338	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G322500	EnsemblPlants:TraesCS3B01G322500.1	SEG:seg	:

Description

No Description!

Coordinates

chr3B:+:521789434..521790765

Molecular Weight (calculated)

46831.7 Da

IEP (calculated)

8.664

GRAVY (calculated)

-0.044

Length

443 amino acids

Sequence
(BLAST)

001: MAEHKRTVST LVLLLLLSFF SASTNATRPP ATLRIPVVHR DAVFPPPPGA SRGNLLSRRA AGYATLKASL CLRRSSAHND RLHSPVMSGL PFDSGEYFAS
101: VGVGTPSTTA LLVIDTGSDL IWLQCKPCRR CHRQMSLLYD PKGSSTYRQI PCSSPRCFPR QGCDGSTGAC GYTMVYGDGS GSRGNLATDR LVFSNDTSVD
201: SIVIGCGHDN EELFDSSAGV LGVGRGAGSL ATQVAPTYGR YFAYCLGDRT SVARSSGSYL AFGRTPEPLC TAFTPLLSNP RRPNLYYVNV AGFSVGGKRV
301: TGGFSSCSLS LDPATGRGGL VVDSGTSISR LPRDAYAALR DAFDARAAAA GMRRLARGMS VFDACYELRG ASVPAVTLHF AGGADVALPP GNYFIPEQGG
401: KYHCLALEAT DDGLSVLGNV LQQGFRVVFD VEKERVGFAP NGC

Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)

001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA

Arabidopsis Description

APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.