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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, vacuole

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • vacuole 3
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid, vacuole
Any Predictor:mitochondrion, plastid, secretory
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:vacuole
Predotar:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU6Hr1G028680.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01300.1 HORVU6Hr1G028680.1 AT4G31920.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G287800.1 Wheat cytosol 74.83 92.44
TraesCS3D01G287600.1 Wheat vacuole 90.7 89.49
TraesCS3B01G322500.1 Wheat vacuole 88.66 88.26
Os01t0720000-00 Rice vacuole 69.39 68.61
KXG33265 Sorghum vacuole 65.99 63.96
Zm00001d043617_P001 Maize endoplasmic reticulum, extracellular, vacuole 63.72 62.17
HORVU3Hr1G052320.1 Barley mitochondrion, plasma membrane, plastid, vacuole 46.71 40.87
KRH47900 Soybean nucleus 43.08 40.17
PGSC0003DMT400048585 Potato vacuole 41.95 40.13
Solyc10g009410.1.1 Tomato extracellular 41.5 39.96
Solyc01g096040.2.1 Tomato nucleus, plastid 43.31 39.71
KRH06457 Soybean endoplasmic reticulum, vacuole 42.86 39.71
VIT_15s0046g00360.t01 Wine grape extracellular 43.99 39.67
CDY15187 Canola vacuole 43.08 39.5
KRH68920 Soybean nucleus 41.27 39.48
CDX90023 Canola vacuole 42.86 39.29
Bra033271.1-P Field mustard vacuole 42.86 39.29
KRG97194 Soybean endoplasmic reticulum 41.95 39.19
PGSC0003DMT400000651 Potato vacuole 42.63 39.17
AT1G01300.1 Thale cress vacuole 42.4 38.56
Bra014420.1-P Field mustard vacuole 41.72 38.1
CDY43952 Canola vacuole 41.5 37.89
CDX89133 Canola vacuole 41.5 37.89
CDX67868 Canola vacuole 41.5 37.73
Bra003476.1-P Field mustard vacuole 41.04 37.32
AT3G61820.1 Thale cress extracellular, vacuole 40.36 36.85
CDY25081 Canola vacuole 40.36 36.7
HORVU6Hr1G071390.1 Barley mitochondrion, plastid 7.94 34.31
HORVU6Hr1G071280.1 Barley plastid 14.51 33.51
HORVU6Hr1G071270.5 Barley plastid 31.52 32.71
HORVU3Hr1G009980.3 Barley plastid 38.55 32.5
GSMUA_Achr3P31640_001 Banana cytosol 41.27 32.38
HORVU5Hr1G072370.1 Barley mitochondrion, vacuole 34.69 31.61
HORVU0Hr1G016890.2 Barley plastid 32.65 30.84
HORVU6Hr1G071160.1 Barley vacuole 31.07 30.04
HORVU7Hr1G045670.1 Barley vacuole 30.84 29.57
HORVU5Hr1G064080.3 Barley endoplasmic reticulum, golgi 31.07 29.53
HORVU7Hr1G109750.4 Barley plastid 31.97 29.19
HORVU7Hr1G109730.1 Barley plasma membrane 32.88 28.88
HORVU6Hr1G071190.2 Barley endoplasmic reticulum, vacuole 29.71 28.85
HORVU7Hr1G116780.2 Barley plastid 35.37 28.62
HORVU7Hr1G094870.4 Barley plastid 33.33 27.89
HORVU7Hr1G045580.8 Barley endoplasmic reticulum 29.02 27.89
HORVU7Hr1G009410.1 Barley endoplasmic reticulum, vacuole 30.84 27.53
HORVU5Hr1G093290.1 Barley mitochondrion, vacuole 31.97 27.49
HORVU7Hr1G009420.4 Barley endoplasmic reticulum, vacuole 30.39 27.13
HORVU7Hr1G009380.1 Barley vacuole 28.8 25.66
HORVU6Hr1G071210.4 Barley vacuole 27.44 25.58
HORVU7Hr1G036020.1 Barley extracellular, plasma membrane, vacuole 27.21 24.44
HORVU7Hr1G116810.1 Barley plastid 18.37 22.75
HORVU7Hr1G009260.2 Barley endoplasmic reticulum 24.26 22.38
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10UniProt:A0A287LHD0InterPro:Aspartic_peptidase_A1GO:GO:0003674GO:GO:0003824
GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0016787
GO:GO:0019538EnsemblPlantsGene:HORVU3Hr1G068330EnsemblPlants:HORVU3Hr1G068330.1InterPro:IPR021109InterPro:IPR033121InterPro:PEPTIDASE_A1
PFAM:PF14541PFAM:PF14543PRINTS:PR00792PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF338
InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NUniParc:UPI000B473DF5
SEG:seg:::::
Description
No Description!
Coordinates
chrchr3H:+:518220469..518221794
Molecular Weight (calculated)
46353.0 Da
IEP (calculated)
7.848
GRAVY (calculated)
-0.010
Length
441 amino acids
Sequence
(BLAST)
001: MAPHKRMFFT LLLLSFSAST TNATRPPATL RIPVVHRDAV FPPPPGASRG SLRAAADAAR YAALMASLGL LRSSAHDDRL HSPVMSGLPF DSGEYFASVG
101: VGTPSTSALL VIDTGSDLIW LQCKPCRHCH RQMSLLYDPK GSSTYSQIPC SSPRCFPHQG CDSSTGACGY AMVYGDGSAS RGNLATDRLV FSNDTSVDSV
201: VIGCGHDNEG LFDSSAGVLG VGRGTGSLAT QVAPTYGLYF AYCLGDRTSV ARSSASYLVF GRTPEPPSTA FTPLLSNPRR PNLYYVNMAG FSVGGERVAG
301: GFSNASLSLD PTTGRGGMVV DSGTSISRLP RDAYAALRDA FDARAAAGGM RRLARGISVF DACYELRGAG VPGVVLHFAG GADVALPPEN YFVPEQGGKY
401: HCLALEATDD GLSVLGNVLQ QGFRVVFDVE KERIGFAPKG C
Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.