Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- plastid 1
- vacuole 7
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90023 | Canola | vacuole | 89.69 | 90.44 |
| Bra033271.1-P | Field mustard | vacuole | 89.69 | 90.44 |
| CDY15187 | Canola | vacuole | 89.48 | 90.23 |
| KRG97194 | Soybean | endoplasmic reticulum | 70.72 | 72.67 |
| KRH68920 | Soybean | nucleus | 68.04 | 71.58 |
| KRH06457 | Soybean | endoplasmic reticulum, vacuole | 68.25 | 69.54 |
| KRH47900 | Soybean | nucleus | 67.63 | 69.34 |
| PGSC0003DMT400000651 | Potato | vacuole | 67.84 | 68.54 |
| Solyc01g096040.2.1 | Tomato | nucleus, plastid | 67.22 | 67.78 |
| VIT_15s0046g00360.t01 | Wine grape | extracellular | 67.63 | 67.08 |
| Solyc10g009410.1.1 | Tomato | extracellular | 62.68 | 66.38 |
| AT3G61820.1 | Thale cress | extracellular, vacuole | 65.57 | 65.84 |
| PGSC0003DMT400048585 | Potato | vacuole | 61.86 | 65.08 |
| Os01t0598600-01 | Rice | nucleus | 56.08 | 54.4 |
| TraesCS3A01G214100.1 | Wheat | nucleus | 54.43 | 54.1 |
| TraesCS3D01G216700.1 | Wheat | vacuole | 54.02 | 53.58 |
| Zm00001d044390_P001 | Maize | plasma membrane | 53.2 | 53.2 |
| Os05t0590000-01 | Rice | extracellular | 52.37 | 52.81 |
| HORVU3Hr1G052320.1 | Barley | mitochondrion, plasma membrane, plastid, vacuole | 54.64 | 52.58 |
| KXG22664 | Sorghum | extracellular, plastid, vacuole | 53.2 | 51.5 |
| EES01017 | Sorghum | mitochondrion, plastid | 54.02 | 50.58 |
| GSMUA_Achr3P31640_001 | Banana | cytosol | 57.94 | 50.0 |
| TraesCS3B01G244800.1 | Wheat | plastid | 54.43 | 49.91 |
| TraesCS3A01G287800.1 | Wheat | cytosol | 35.46 | 48.18 |
| AT3G18490.1 | Thale cress | plastid | 48.25 | 46.8 |
| AT1G25510.1 | Thale cress | vacuole | 46.6 | 46.79 |
| EES16428 | Sorghum | extracellular | 45.77 | 44.94 |
| OQU92922 | Sorghum | vacuole | 44.95 | 44.49 |
| AT3G20015.1 | Thale cress | endoplasmic reticulum, vacuole | 42.68 | 44.04 |
| KXG24090 | Sorghum | extracellular | 44.95 | 44.04 |
| Os01t0720000-00 | Rice | vacuole | 40.41 | 43.95 |
| OQU79707 | Sorghum | vacuole | 44.74 | 43.14 |
| KXG24092 | Sorghum | vacuole | 43.51 | 42.89 |
| HORVU3Hr1G068330.1 | Barley | plastid, vacuole | 38.56 | 42.4 |
| TraesCS3D01G287600.1 | Wheat | vacuole | 38.76 | 42.06 |
| Zm00001d043617_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 39.18 | 42.04 |
| TraesCS3B01G322500.1 | Wheat | vacuole | 38.14 | 41.76 |
| KXG33265 | Sorghum | vacuole | 37.94 | 40.44 |
| AT5G10770.1 | Thale cress | vacuole | 33.4 | 34.18 |
| AT5G10760.1 | Thale cress | vacuole | 32.58 | 34.05 |
| AT2G42980.1 | Thale cress | vacuole | 31.96 | 29.41 |
| AT3G59080.1 | Thale cress | vacuole | 31.75 | 28.79 |
| AT1G79720.1 | Thale cress | extracellular, golgi, vacuole | 28.66 | 28.72 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | EntrezGene:839375 | MEROPS:A01.A05 | ProteinID:AAF97328.1 | ProteinID:AEE27268.1 |
| ArrayExpress:AT1G01300 | EnsemblPlantsGene:AT1G01300 | RefSeq:AT1G01300 | TAIR:AT1G01300 | RefSeq:AT1G01300-TAIR-G | EnsemblPlants:AT1G01300.1 |
| TAIR:AT1G01300.1 | EMBL:AY088528 | EMBL:AY128344 | InterPro:Aspartic_peptidase_A1 | EMBL:BT006619 | InterPro:CND41-like |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009505 |
| GO:GO:0009628 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 | GO:GO:0030312 |
| GO:GO:0080167 | InterPro:IPR021109 | InterPro:IPR033121 | RefSeq:NP_171637.1 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 |
| PFAM:PF14543 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00792 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF308 | InterPro:Peptidase_aspartic_dom_sf |
| UniProt:Q9LNJ3 | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | TMHMM:TMhelix |
| UniParc:UPI000009E0F7 | SEG:seg | : | : | : | : |
Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
Coordinates
chr1:+:116784..118845
Molecular Weight (calculated)
52178.1 Da
IEP (calculated)
9.161
GRAVY (calculated)
-0.040
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.