Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS6A01G146200.3 | |
| TraesCS6B01G174400.1 | |
| TraesCS6D01G135500.3 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G01300.1 | TraesCS6A01G146200.3 | AT4G31920.1 | 18642946 |
| AT1G01300.1 | TraesCS6B01G174400.1 | AT4G31920.1 | 18642946 |
| AT1G01300.1 | TraesCS6D01G135500.3 | AT4G31920.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G214100.1 | Wheat | nucleus | 97.75 | 97.95 |
| HORVU3Hr1G052320.1 | Barley | mitochondrion, plasma membrane, plastid, vacuole | 95.71 | 92.86 |
| TraesCS3B01G244800.1 | Wheat | plastid | 97.55 | 90.17 |
| Os01t0598600-01 | Rice | nucleus | 84.05 | 82.2 |
| Zm00001d044390_P001 | Maize | plasma membrane | 79.14 | 79.79 |
| EES01017 | Sorghum | mitochondrion, plastid | 81.39 | 76.83 |
| Solyc01g096040.2.1 | Tomato | nucleus, plastid | 57.06 | 58.0 |
| PGSC0003DMT400000651 | Potato | vacuole | 56.85 | 57.92 |
| KRH68920 | Soybean | nucleus | 53.78 | 57.05 |
| KRG97194 | Soybean | endoplasmic reticulum | 55.01 | 56.99 |
| KRH47900 | Soybean | nucleus | 54.81 | 56.66 |
| VIT_15s0046g00360.t01 | Wine grape | extracellular | 55.83 | 55.83 |
| EES16428 | Sorghum | extracellular | 56.24 | 55.67 |
| Bra033271.1-P | Field mustard | vacuole | 54.6 | 55.51 |
| CDX90023 | Canola | vacuole | 54.6 | 55.51 |
| CDY15187 | Canola | vacuole | 54.4 | 55.3 |
| KXG24092 | Sorghum | vacuole | 55.62 | 55.28 |
| KRH06457 | Soybean | endoplasmic reticulum, vacuole | 53.78 | 55.25 |
| CDY43952 | Canola | vacuole | 53.99 | 54.66 |
| OQU92922 | Sorghum | vacuole | 54.6 | 54.49 |
| Bra014420.1-P | Field mustard | vacuole | 53.78 | 54.45 |
| CDX89133 | Canola | vacuole | 53.78 | 54.45 |
| KXG24090 | Sorghum | extracellular | 55.01 | 54.34 |
| OQU79707 | Sorghum | vacuole | 55.62 | 54.08 |
| AT1G01300.1 | Thale cress | vacuole | 53.58 | 54.02 |
| Solyc10g009410.1.1 | Tomato | extracellular | 50.51 | 53.93 |
| AT3G61820.1 | Thale cress | extracellular, vacuole | 52.97 | 53.62 |
| CDX67868 | Canola | vacuole | 52.76 | 53.2 |
| Bra003476.1-P | Field mustard | vacuole | 52.35 | 52.78 |
| PGSC0003DMT400048585 | Potato | vacuole | 49.69 | 52.71 |
| GSMUA_Achr3P31640_001 | Banana | cytosol | 59.71 | 51.96 |
| CDY25081 | Canola | vacuole | 51.33 | 51.75 |
| TraesCS3D01G287600.1 | Wheat | vacuole | 42.74 | 46.76 |
| TraesCS2D01G560800.1 | Wheat | extracellular | 39.26 | 40.42 |
| TraesCS2D01G569500.1 | Wheat | plastid | 23.31 | 38.13 |
| TraesCS5D01G133000.1 | Wheat | extracellular | 12.68 | 37.8 |
| TraesCS7D01G047300.1 | Wheat | plastid | 18.2 | 36.18 |
| TraesCS7D01G516100.1 | Wheat | vacuole | 36.4 | 36.11 |
| TraesCS7D01G222800.1 | Wheat | unclear | 33.54 | 35.73 |
| TraesCS6D01G264200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.13 | 34.39 |
| TraesCS7D01G516400.1 | Wheat | vacuole | 35.58 | 34.12 |
| TraesCS7D01G187300.1 | Wheat | vacuole | 31.9 | 33.33 |
| TraesCS5D01G267300.1 | Wheat | mitochondrion | 32.72 | 33.06 |
| TraesCS6D01G264000.2 | Wheat | unclear | 30.27 | 32.67 |
| TraesCS7D01G475300.1 | Wheat | extracellular, vacuole | 30.27 | 32.46 |
| TraesCS7D01G187500.1 | Wheat | endoplasmic reticulum, vacuole | 31.29 | 32.35 |
| TraesCS7D01G475500.1 | Wheat | endoplasmic reticulum | 29.86 | 31.81 |
| TraesCS7D01G187400.1 | Wheat | extracellular, vacuole | 30.88 | 31.79 |
| TraesCS7D01G223500.1 | Wheat | plastid | 28.02 | 31.79 |
| TraesCS7D01G223800.1 | Wheat | extracellular, vacuole | 29.86 | 31.6 |
| TraesCS7D01G399500.1 | Wheat | unclear | 33.74 | 31.55 |
| TraesCS5D01G229700.1 | Wheat | endoplasmic reticulum, golgi | 29.65 | 31.39 |
| TraesCS7D01G224300.1 | Wheat | vacuole | 29.86 | 31.33 |
| TraesCS6D01G403100.1 | Wheat | vacuole | 29.45 | 30.9 |
| TraesCS7D01G048200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.27 | 29.6 |
| TraesCS7D01G475600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.06 | 29.22 |
| TraesCS5D01G386300.1 | Wheat | plastid, vacuole | 30.47 | 28.88 |
| TraesCS7D01G175100.2 | Wheat | extracellular, plasma membrane, vacuole | 28.63 | 28.51 |
| TraesCS6D01G263900.1 | Wheat | plasma membrane, vacuole | 25.56 | 28.28 |
| TraesCS7D01G048000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 29.24 | 28.09 |
| TraesCS6D01G263700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 33.74 | 27.92 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | InterPro:CND41-like | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0019538 | InterPro:IPR021109 | InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 |
| PRINTS:PR00792 | ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF355 | InterPro:Peptidase_aspartic_dom_sf |
| SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | EnsemblPlantsGene:TraesCS3D01G216700 | EnsemblPlants:TraesCS3D01G216700.1 |
| TIGR:cd05472 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:294048395..294049864
Molecular Weight (calculated)
50717.3 Da
IEP (calculated)
8.894
GRAVY (calculated)
0.070
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMAPPPLLP LSALLLLLLT AASHASAKPV QTQSLLATPL SPDRVSAPSE LARDDDTNVF AAAEDAVAGT VRFRVVHRDD FSKNATAAEL LAHRLERDEK
101: RAARLSAAAG AANATRRGGG GVVAPVVSGL AQGSGEYFTK IGVGTPATPA LMVLDTGSDV VWLQCAPCRR CYEQSGQVFD PRRSRSYGAV GCAAPLCRRL
201: DSGGCDLRRS ACLYQVAYGD GSVTAGDFAT ETLTFAGGAR VARVALGCGH DNEGLFVAAA GLLGLGRGSL SFPTQISRRY GRSFSYCLVD RTSSANSASR
301: SSTVTFGSGA LGSTVASSFT PMVKNPRMET FYYVQLIGIS VGGARVPGVA NSDLRLDPSS GRGGVIVDSG TSVTRLARAA YSALRDAFRG AAAGLRLSPG
401: GFSLFDTCYD LSGRKVVKVP TVSMHFAGGA EAALPPENYL IPVDSKGTFC FAFAGTDGGV SIIGNIQQQG FRVVFDGDGQ RVAFVPRGC
101: RAARLSAAAG AANATRRGGG GVVAPVVSGL AQGSGEYFTK IGVGTPATPA LMVLDTGSDV VWLQCAPCRR CYEQSGQVFD PRRSRSYGAV GCAAPLCRRL
201: DSGGCDLRRS ACLYQVAYGD GSVTAGDFAT ETLTFAGGAR VARVALGCGH DNEGLFVAAA GLLGLGRGSL SFPTQISRRY GRSFSYCLVD RTSSANSASR
301: SSTVTFGSGA LGSTVASSFT PMVKNPRMET FYYVQLIGIS VGGARVPGVA NSDLRLDPSS GRGGVIVDSG TSVTRLARAA YSALRDAFRG AAAGLRLSPG
401: GFSLFDTCYD LSGRKVVKVP TVSMHFAGGA EAALPPENYL IPVDSKGTFC FAFAGTDGGV SIIGNIQQQG FRVVFDGDGQ RVAFVPRGC
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.