Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G312300.1 | Wheat | extracellular, vacuole | 88.24 | 92.42 |
| TraesCS2D01G569500.1 | Wheat | plastid | 40.95 | 60.54 |
| TraesCS6D01G264000.2 | Wheat | unclear | 60.18 | 58.72 |
| Os02t0720600-01 | Rice | extracellular | 56.79 | 54.21 |
| TraesCS7D01G475300.1 | Wheat | extracellular, vacuole | 55.43 | 53.73 |
| TraesCS7D01G475500.1 | Wheat | endoplasmic reticulum | 54.07 | 52.07 |
| TraesCS7D01G475600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 55.43 | 48.71 |
| TraesCS7D01G047300.1 | Wheat | plastid | 26.92 | 48.37 |
| TraesCS7D01G224300.1 | Wheat | vacuole | 44.57 | 42.27 |
| GSMUA_Achr3P04040_001 | Banana | mitochondrion | 35.29 | 41.6 |
| TraesCS5D01G133000.1 | Wheat | extracellular | 14.71 | 39.63 |
| TraesCS7D01G175100.2 | Wheat | extracellular, plasma membrane, vacuole | 43.67 | 39.31 |
| GSMUA_Achr3P04020_001 | Banana | vacuole | 34.84 | 38.89 |
| GSMUA_Achr3P04060_001 | Banana | vacuole | 34.39 | 38.19 |
| TraesCS7D01G048000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 42.99 | 37.33 |
| TraesCS7D01G187400.1 | Wheat | extracellular, vacuole | 40.05 | 37.26 |
| TraesCS7D01G187500.1 | Wheat | endoplasmic reticulum, vacuole | 39.82 | 37.21 |
| TraesCS7D01G187300.1 | Wheat | vacuole | 39.14 | 36.97 |
| TraesCS5D01G267300.1 | Wheat | mitochondrion | 39.14 | 35.74 |
| TraesCS7D01G048200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 38.24 | 33.8 |
| CDX97055 | Canola | cytosol, plastid, vacuole | 31.9 | 33.65 |
| CDY40117 | Canola | extracellular, vacuole | 36.2 | 33.54 |
| CDX85746 | Canola | vacuole | 36.2 | 33.54 |
| Bra028568.1-P | Field mustard | vacuole | 36.2 | 33.54 |
| CDX69804 | Canola | vacuole | 35.97 | 33.4 |
| TraesCS6D01G263700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 44.34 | 33.16 |
| TraesCS7D01G399500.1 | Wheat | unclear | 39.14 | 33.08 |
| AT5G10770.1 | Thale cress | vacuole | 35.29 | 32.91 |
| VIT_04s0008g07110.t01 | Wine grape | extracellular | 35.29 | 32.43 |
| CDX97058 | Canola | cytosol, extracellular, nucleus | 35.75 | 32.18 |
| KRH46246 | Soybean | cytosol | 22.62 | 32.15 |
| VIT_04s0008g07080.t01 | Wine grape | extracellular | 31.22 | 31.94 |
| TraesCS5D01G229700.1 | Wheat | endoplasmic reticulum, golgi | 32.81 | 31.39 |
| TraesCS7D01G222800.1 | Wheat | unclear | 32.35 | 31.15 |
| CDX97054 | Canola | extracellular, plastid, vacuole | 33.26 | 31.08 |
| AT5G10760.1 | Thale cress | vacuole | 32.58 | 31.03 |
| CDY70207 | Canola | plastid, vacuole | 33.03 | 30.93 |
| KRG98688 | Soybean | nucleus | 34.16 | 30.82 |
| TraesCS7D01G223500.1 | Wheat | plastid | 29.86 | 30.63 |
| KRH46241 | Soybean | nucleus, vacuole | 33.71 | 30.53 |
| KRH46245 | Soybean | nucleus | 33.26 | 30.5 |
| Bra009007.1-P | Field mustard | plastid, vacuole | 29.86 | 30.34 |
| KRH46242 | Soybean | vacuole | 33.26 | 30.31 |
| CDY72573 | Canola | plastid, vacuole | 29.64 | 30.11 |
| TraesCS6D01G264200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 31.67 | 29.72 |
| TraesCS6D01G403100.1 | Wheat | vacuole | 31.22 | 29.61 |
| PGSC0003DMT400059566 | Potato | extracellular | 32.35 | 29.48 |
| CDY40116 | Canola | extracellular | 31.9 | 29.44 |
| KRH73276 | Soybean | cytosol | 27.15 | 29.34 |
| CDX85747 | Canola | extracellular, vacuole | 31.67 | 29.29 |
| Solyc08g067100.2.1 | Tomato | extracellular, plastid | 33.03 | 29.14 |
| Bra028569.1-P | Field mustard | extracellular | 31.45 | 29.08 |
| TraesCS7D01G223800.1 | Wheat | extracellular, vacuole | 30.09 | 28.79 |
| KRH73277 | Soybean | extracellular | 29.86 | 28.63 |
| TraesCS3D01G287600.1 | Wheat | vacuole | 27.6 | 27.29 |
| TraesCS2D01G560800.1 | Wheat | extracellular | 28.73 | 26.74 |
| KRH73176 | Soybean | extracellular, vacuole | 27.83 | 26.62 |
| TraesCS5D01G386300.1 | Wheat | plastid, vacuole | 30.32 | 25.97 |
| TraesCS3D01G216700.1 | Wheat | vacuole | 28.28 | 25.56 |
| TraesCS7D01G516100.1 | Wheat | vacuole | 25.79 | 23.12 |
| CDX69805 | Canola | cytosol | 29.64 | 22.98 |
| TraesCS7D01G516400.1 | Wheat | vacuole | 26.24 | 22.75 |
| Bra009006.1-P | Field mustard | plasma membrane, plastid, vacuole | 35.97 | 15.53 |
| GSMUA_Achr3P04070_001 | Banana | nucleus | 38.01 | 13.73 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR021109 |
| InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PFscan:PS51767 | PANTHER:PTHR13683 |
| PANTHER:PTHR13683:SF290 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N |
| EnsemblPlantsGene:TraesCS6D01G263900 | EnsemblPlants:TraesCS6D01G263900.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6D:+:372768283..372769683
Molecular Weight (calculated)
46545.2 Da
IEP (calculated)
4.452
GRAVY (calculated)
0.045
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQGLMTAMS SVSQQLLLLL FCYYSAAARA EAVCAEQPAT PSSSSGPTVP LNHRYGPCSP APSTVEPTMA ELLRADQLRA KYVRRKFSGT DGLQPLDLTV
101: PADLGLALGT LQYVITVGIG SPVVTQTMMI DTSGDVSWVH CRSPTGSTLF DPSKSTTYAP FSCSAAECTQ LGNKGNGCSN STCQYVIEYT NQPNNTGTYG
201: SDTLMLSSSD TVENFQFGCR QDEAEVEDSM DGLMGLGGDV QSLVSQTEAT YGKAYSYCLP PTNATSGFLT LGGPNDTSGF LSTPMIRWEQ VPTFHGVLLQ
301: DIVVNGTQLN IPPSAFAAGS LVSSGAYITR LPPAAYTALK TAFKASMTQY KTMPARSILD TCFDFTGLEL DSITVPDVAL VFDGGAVVNL DRSGVVIGNC
401: LAFAASTNPS GIPSVIGNVQ QRTLEVLLNV GQSVVGFRPG AC
101: PADLGLALGT LQYVITVGIG SPVVTQTMMI DTSGDVSWVH CRSPTGSTLF DPSKSTTYAP FSCSAAECTQ LGNKGNGCSN STCQYVIEYT NQPNNTGTYG
201: SDTLMLSSSD TVENFQFGCR QDEAEVEDSM DGLMGLGGDV QSLVSQTEAT YGKAYSYCLP PTNATSGFLT LGGPNDTSGF LSTPMIRWEQ VPTFHGVLLQ
301: DIVVNGTQLN IPPSAFAAGS LVSSGAYITR LPPAAYTALK TAFKASMTQY KTMPARSILD TCFDFTGLEL DSITVPDVAL VFDGGAVVNL DRSGVVIGNC
401: LAFAASTNPS GIPSVIGNVQ QRTLEVLLNV GQSVVGFRPG AC
001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV
Arabidopsis Description
At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.