Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS6A01G146200.3 | |
| TraesCS6B01G174400.1 | |
| TraesCS6D01G135500.3 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G01300.1 | TraesCS6A01G146200.3 | AT4G31920.1 | 18642946 |
| AT1G01300.1 | TraesCS6B01G174400.1 | AT4G31920.1 | 18642946 |
| AT1G01300.1 | TraesCS6D01G135500.3 | AT4G31920.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G287800.1 | Wheat | cytosol | 75.84 | 94.96 |
| TraesCS3B01G322500.1 | Wheat | vacuole | 93.06 | 93.91 |
| HORVU3Hr1G068330.1 | Barley | plastid, vacuole | 89.49 | 90.7 |
| Os01t0720000-00 | Rice | vacuole | 67.56 | 67.71 |
| KXG33265 | Sorghum | vacuole | 63.31 | 62.2 |
| Zm00001d043617_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 61.74 | 61.06 |
| TraesCS3D01G216700.1 | Wheat | vacuole | 46.76 | 42.74 |
| Solyc01g096040.2.1 | Tomato | nucleus, plastid | 43.62 | 40.54 |
| Solyc10g009410.1.1 | Tomato | extracellular | 41.39 | 40.39 |
| PGSC0003DMT400000651 | Potato | vacuole | 43.18 | 40.21 |
| KRH47900 | Soybean | nucleus | 42.28 | 39.96 |
| KRH06457 | Soybean | endoplasmic reticulum, vacuole | 42.51 | 39.92 |
| PGSC0003DMT400048585 | Potato | vacuole | 41.16 | 39.91 |
| CDY15187 | Canola | vacuole | 42.51 | 39.5 |
| KRH68920 | Soybean | nucleus | 40.72 | 39.48 |
| Bra033271.1-P | Field mustard | vacuole | 42.28 | 39.29 |
| CDX90023 | Canola | vacuole | 42.28 | 39.29 |
| KRG97194 | Soybean | endoplasmic reticulum | 41.39 | 39.19 |
| VIT_15s0046g00360.t01 | Wine grape | extracellular | 42.73 | 39.06 |
| AT1G01300.1 | Thale cress | vacuole | 42.06 | 38.76 |
| CDY43952 | Canola | vacuole | 40.94 | 37.89 |
| Bra014420.1-P | Field mustard | vacuole | 40.72 | 37.68 |
| CDX89133 | Canola | vacuole | 40.49 | 37.47 |
| TraesCS2D01G560800.1 | Wheat | extracellular | 39.6 | 37.26 |
| AT3G61820.1 | Thale cress | extracellular, vacuole | 40.04 | 37.06 |
| CDX67868 | Canola | vacuole | 40.04 | 36.91 |
| Bra003476.1-P | Field mustard | vacuole | 39.6 | 36.49 |
| CDY25081 | Canola | vacuole | 38.93 | 35.88 |
| TraesCS7D01G047300.1 | Wheat | plastid | 19.02 | 34.55 |
| TraesCS2D01G569500.1 | Wheat | plastid | 22.82 | 34.11 |
| GSMUA_Achr3P31640_001 | Banana | cytosol | 41.83 | 33.27 |
| TraesCS7D01G222800.1 | Wheat | unclear | 34.0 | 33.12 |
| TraesCS6D01G264200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.33 | 31.63 |
| TraesCS5D01G133000.1 | Wheat | extracellular | 11.41 | 31.1 |
| TraesCS7D01G475500.1 | Wheat | endoplasmic reticulum | 31.77 | 30.94 |
| TraesCS7D01G516100.1 | Wheat | vacuole | 34.0 | 30.83 |
| TraesCS5D01G229700.1 | Wheat | endoplasmic reticulum, golgi | 31.77 | 30.74 |
| TraesCS5D01G267300.1 | Wheat | mitochondrion | 33.11 | 30.58 |
| TraesCS7D01G516400.1 | Wheat | vacuole | 34.68 | 30.39 |
| TraesCS7D01G475300.1 | Wheat | extracellular, vacuole | 30.43 | 29.82 |
| TraesCS6D01G264000.2 | Wheat | unclear | 29.75 | 29.36 |
| TraesCS7D01G224300.1 | Wheat | vacuole | 30.2 | 28.97 |
| TraesCS7D01G223500.1 | Wheat | plastid | 27.74 | 28.77 |
| TraesCS6D01G403100.1 | Wheat | vacuole | 29.98 | 28.76 |
| TraesCS5D01G386300.1 | Wheat | plastid, vacuole | 33.11 | 28.68 |
| TraesCS7D01G399500.1 | Wheat | unclear | 33.33 | 28.49 |
| TraesCS7D01G187300.1 | Wheat | vacuole | 29.53 | 28.21 |
| TraesCS7D01G187500.1 | Wheat | endoplasmic reticulum, vacuole | 29.75 | 28.12 |
| TraesCS7D01G475600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 31.54 | 28.03 |
| TraesCS7D01G187400.1 | Wheat | extracellular, vacuole | 29.75 | 28.0 |
| TraesCS6D01G263900.1 | Wheat | plasma membrane, vacuole | 27.29 | 27.6 |
| TraesCS7D01G048200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.87 | 27.6 |
| TraesCS7D01G048000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.2 | 26.52 |
| TraesCS7D01G223800.1 | Wheat | extracellular, vacuole | 27.29 | 26.41 |
| TraesCS6D01G263700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 33.56 | 25.38 |
| TraesCS7D01G175100.2 | Wheat | extracellular, plasma membrane, vacuole | 27.52 | 25.05 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR021109 |
| InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PRINTS:PR00792 | PFscan:PS51767 |
| PANTHER:PTHR13683 | PANTHER:PTHR13683:SF338 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C |
| InterPro:TAXi_N | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G287600 | EnsemblPlants:TraesCS3D01G287600.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr3D:+:396434164..396435507
Molecular Weight (calculated)
47451.3 Da
IEP (calculated)
8.312
GRAVY (calculated)
-0.053
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQHKRAVST LVLLLLLLFF SASTNATRPP ATLRIPVVHR DAVFPPPPGA SRGSLLSRRA AADAARYAAL KASLCLRRSS AHDDRLHSPV MSGLPFDSGE
101: YFASIGVGTP STTALLVIDT GSDLIWLQCK PCRRCHRQMS LLYDPKDSST YRQIPCSSPR CFPRQGCDSS TGACGYTMVY GDGSGSRGNL ATDRLVFSND
201: TSVDSIVIGC GHDNEELFDS SAGVLGVGRG TGSLATQVAP TYGRYFAYCL GDRTSVARSS ASYLAFGRTP EPPSTAFTPL LSNPRRPNLY YVNMAGFSVG
301: GERVAGGFCS SGLWLDPANG RGGVVVDSGT SISRLPRDAY AALRDAFDAR AAAAGMRRLA RGISVFDACY ELRGASVPAV TLHFAGGADV ALPPENYFIP
401: EQGGRYHCLA LEATDDGLSV VGNVLQQGFR VVFDVEKERV GFAPNGC
101: YFASIGVGTP STTALLVIDT GSDLIWLQCK PCRRCHRQMS LLYDPKDSST YRQIPCSSPR CFPRQGCDSS TGACGYTMVY GDGSGSRGNL ATDRLVFSND
201: TSVDSIVIGC GHDNEELFDS SAGVLGVGRG TGSLATQVAP TYGRYFAYCL GDRTSVARSS ASYLAFGRTP EPPSTAFTPL LSNPRRPNLY YVNMAGFSVG
301: GERVAGGFCS SGLWLDPANG RGGVVVDSGT SISRLPRDAY AALRDAFDAR AAAAGMRRLA RGISVFDACY ELRGASVPAV TLHFAGGADV ALPPENYFIP
401: EQGGRYHCLA LEATDDGLSV VGNVLQQGFR VVFDVEKERV GFAPNGC
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.