Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400008290 | |
| PGSC0003DMT400020233 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G01300.1 | PGSC0003DMT400008290 | AT4G31920.1 | 18642946 |
| AT1G01300.1 | PGSC0003DMT400020233 | AT4G31920.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g096040.2.1 | Tomato | nucleus, plastid | 96.46 | 96.26 |
| PGSC0003DMT400048585 | Potato | vacuole | 71.46 | 74.4 |
| KRG97194 | Soybean | endoplasmic reticulum | 70.21 | 71.4 |
| KRH68920 | Soybean | nucleus | 67.92 | 70.72 |
| KRH47900 | Soybean | nucleus | 69.38 | 70.4 |
| VIT_15s0046g00360.t01 | Wine grape | extracellular | 71.67 | 70.35 |
| KRH06457 | Soybean | endoplasmic reticulum, vacuole | 69.17 | 69.75 |
| CDX90023 | Canola | vacuole | 69.17 | 69.02 |
| CDY15187 | Canola | vacuole | 69.17 | 69.02 |
| Bra033271.1-P | Field mustard | vacuole | 68.96 | 68.81 |
| AT1G01300.1 | Thale cress | vacuole | 68.54 | 67.84 |
| AT3G61820.1 | Thale cress | extracellular, vacuole | 65.0 | 64.6 |
| CDX67868 | Canola | vacuole | 64.58 | 63.92 |
| CDX89133 | Canola | vacuole | 64.17 | 63.77 |
| Bra003476.1-P | Field mustard | vacuole | 64.17 | 63.51 |
| Bra014420.1-P | Field mustard | vacuole | 63.54 | 63.15 |
| CDY43952 | Canola | vacuole | 63.12 | 62.73 |
| CDY25081 | Canola | vacuole | 62.92 | 62.27 |
| TraesCS3D01G216700.1 | Wheat | vacuole | 57.92 | 56.85 |
| Os01t0598600-01 | Rice | nucleus | 59.17 | 56.8 |
| TraesCS3A01G214100.1 | Wheat | nucleus | 57.71 | 56.76 |
| HORVU3Hr1G052320.1 | Barley | mitochondrion, plasma membrane, plastid, vacuole | 58.33 | 55.56 |
| Zm00001d044390_P001 | Maize | plasma membrane | 55.62 | 55.05 |
| Os05t0590000-01 | Rice | extracellular | 53.12 | 53.01 |
| EES01017 | Sorghum | mitochondrion, plastid | 57.08 | 52.9 |
| TraesCS3B01G244800.1 | Wheat | plastid | 57.71 | 52.36 |
| KXG22664 | Sorghum | extracellular, plastid, vacuole | 53.12 | 50.9 |
| PGSC0003DMT400033734 | Potato | vacuole | 48.75 | 48.55 |
| GSMUA_Achr3P31640_001 | Banana | cytosol | 56.25 | 48.04 |
| TraesCS3A01G287800.1 | Wheat | cytosol | 35.0 | 47.06 |
| OQU92922 | Sorghum | vacuole | 46.88 | 45.92 |
| PGSC0003DMT400014352 | Potato | endoplasmic reticulum, vacuole | 45.62 | 45.06 |
| EES16428 | Sorghum | extracellular | 46.25 | 44.94 |
| PGSC0003DMT400005606 | Potato | nucleus | 43.33 | 44.64 |
| KXG24090 | Sorghum | extracellular | 45.83 | 44.44 |
| Os01t0720000-00 | Rice | vacuole | 41.04 | 44.17 |
| KXG24092 | Sorghum | vacuole | 45.21 | 44.11 |
| PGSC0003DMT400065088 | Potato | extracellular | 43.12 | 43.22 |
| TraesCS3D01G287600.1 | Wheat | vacuole | 40.21 | 43.18 |
| Zm00001d043617_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 40.42 | 42.92 |
| OQU79707 | Sorghum | vacuole | 44.79 | 42.74 |
| HORVU3Hr1G068330.1 | Barley | plastid, vacuole | 39.17 | 42.63 |
| TraesCS3B01G322500.1 | Wheat | vacuole | 38.96 | 42.21 |
| KXG33265 | Sorghum | vacuole | 39.58 | 41.76 |
| PGSC0003DMT400010420 | Potato | endoplasmic reticulum, plastid | 42.08 | 41.14 |
| PGSC0003DMT400095799 | Potato | vacuole | 35.42 | 31.72 |
| PGSC0003DMT400091831 | Potato | vacuole | 36.04 | 31.63 |
| PGSC0003DMT400059566 | Potato | extracellular | 31.88 | 31.55 |
| PGSC0003DMT400036706 | Potato | vacuole | 31.04 | 31.43 |
| PGSC0003DMT400074390 | Potato | vacuole | 30.21 | 30.92 |
Protein Annotations
| EntrezGene:102585095 | MapMan:19.4.3.1 | Gene3D:2.40.70.10 | MEROPS:A01.A05 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS |
| InterPro:CND41-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR021109 | InterPro:IPR033121 |
| UniProt:M0ZH35 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | EnsemblPlantsGene:PGSC0003DMG400000231 | PGSC:PGSC0003DMG400000231 |
| EnsemblPlants:PGSC0003DMT400000651 | PRINTS:PR00792 | ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF308 |
| InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | InterPro:TAXi_C | InterPro:TAXi_N | TMHMM:TMhelix | UniParc:UPI0002966C6A |
| RefSeq:XP_006339720.1 | SEG:seg | : | : | : | : |
Description
Aspartic proteinase nepenthesin-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400000231]
Coordinates
chr1:-:73543391..73545202
Molecular Weight (calculated)
51508.4 Da
IEP (calculated)
8.748
GRAVY (calculated)
0.024
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKTISLSF LFLSLFAIYV SSTSLQYQTL LLHSLPLTQL QSLDFDAQLL SGDGSDLDPD NTLSLQLHHV DLVSPSSFNA TPHALFKLRL QRDAYRAKAI
101: SDLAAANATV GRRAGKPHAG GRDFSSSVVS GLSQGSGEYF TRIGVGTPPK YVYMVLDTGS DVVWIQCSPC KKCYTQSDPV FDPSKSSSFL GVACGSPLCR
201: RLDSASCNRK KCLYQVSYGD GSFTVGDFST ETLTFRGTRV NNMALGCGHD NEGLFVGAAG LLGLGRGRLS FPTQAGRRFG RKFSYCLVDR SASSRPSYLV
301: FGESAVSRTA VFTPLVNNPK LDTFYYVELT GISVGGARVP AIRPSLFKLD AAGDGGVIVD SGTSVTRLTR PAYVALRDSF RMGARDLKRA PDFSLFDTCF
401: DLSGKTEVKV PTVVMHFRGA DVSLPASNYL IPVDSDGTFC FAFAGTMSGL SIIGNIQQQG FRVVFDLAGS RLGFAPRGCA
101: SDLAAANATV GRRAGKPHAG GRDFSSSVVS GLSQGSGEYF TRIGVGTPPK YVYMVLDTGS DVVWIQCSPC KKCYTQSDPV FDPSKSSSFL GVACGSPLCR
201: RLDSASCNRK KCLYQVSYGD GSFTVGDFST ETLTFRGTRV NNMALGCGHD NEGLFVGAAG LLGLGRGRLS FPTQAGRRFG RKFSYCLVDR SASSRPSYLV
301: FGESAVSRTA VFTPLVNNPK LDTFYYVELT GISVGGARVP AIRPSLFKLD AAGDGGVIVD SGTSVTRLTR PAYVALRDSF RMGARDLKRA PDFSLFDTCF
401: DLSGKTEVKV PTVVMHFRGA DVSLPASNYL IPVDSDGTFC FAFAGTMSGL SIIGNIQQQG FRVVFDLAGS RLGFAPRGCA
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.