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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
EES06387

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01300.1 EES06387 AT4G31920.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES16428 Sorghum extracellular 64.43 64.17
OQU92922 Sorghum vacuole 63.41 63.67
KXG24090 Sorghum extracellular 62.8 62.42
OQU79707 Sorghum vacuole 62.2 60.84
TraesCS3A01G214100.1 Wheat nucleus 55.69 56.15
TraesCS3D01G216700.1 Wheat vacuole 55.28 55.62
Os01t0598600-01 Rice nucleus 55.49 54.6
HORVU3Hr1G052320.1 Barley mitochondrion, plasma membrane, plastid, vacuole 55.89 54.56
EES01017 Sorghum mitochondrion, plastid 55.69 52.9
TraesCS3B01G244800.1 Wheat plastid 55.89 51.98
KXG22664 Sorghum extracellular, plastid, vacuole 50.61 49.7
Solyc01g096040.2.1 Tomato nucleus, plastid 44.72 45.74
KRH47900 Soybean nucleus 43.5 45.24
PGSC0003DMT400000651 Potato vacuole 44.11 45.21
KRH68920 Soybean nucleus 41.67 44.47
Solyc10g009410.1.1 Tomato extracellular 41.26 44.32
AT3G61820.1 Thale cress extracellular, vacuole 43.5 44.31
CDY43952 Canola vacuole 43.5 44.31
KRH06457 Soybean endoplasmic reticulum, vacuole 42.68 44.12
PGSC0003DMT400048585 Potato vacuole 41.26 44.03
CDX89133 Canola vacuole 43.09 43.89
CDX90023 Canola vacuole 42.89 43.87
Bra033271.1-P Field mustard vacuole 42.89 43.87
Bra003476.1-P Field mustard vacuole 43.09 43.71
Bra014420.1-P Field mustard vacuole 42.89 43.69
CDY15187 Canola vacuole 42.68 43.66
KRG97194 Soybean endoplasmic reticulum 41.87 43.64
CDX67868 Canola vacuole 42.89 43.51
AT1G01300.1 Thale cress vacuole 42.89 43.51
VIT_15s0046g00360.t01 Wine grape extracellular 42.68 42.94
CDY25081 Canola vacuole 42.07 42.68
KXG33265 Sorghum vacuole 36.38 39.34
EES02514 Sorghum endoplasmic reticulum, vacuole 40.65 39.29
GSMUA_Achr3P31640_001 Banana cytosol 44.72 39.15
OQU82570 Sorghum endoplasmic reticulum, vacuole 33.74 35.62
EES07349 Sorghum vacuole 31.1 33.41
OQU76291 Sorghum vacuole 31.5 32.98
EES07336 Sorghum vacuole 30.69 32.4
EES07335 Sorghum vacuole 30.08 32.17
EES07353 Sorghum extracellular, vacuole 30.69 31.86
EER88307 Sorghum endoplasmic reticulum, extracellular, vacuole 29.88 31.61
EER96951 Sorghum endoplasmic reticulum 31.3 31.56
EER88303 Sorghum vacuole 30.08 31.56
OQU76307 Sorghum endoplasmic reticulum, extracellular, vacuole 30.08 31.56
EER96952 Sorghum mitochondrion 30.49 31.18
EES05617 Sorghum endoplasmic reticulum, vacuole 29.27 30.9
EES03312 Sorghum extracellular 29.27 30.77
EER89658 Sorghum vacuole 28.86 30.6
OQU76292 Sorghum plasma membrane, plastid, vacuole 30.28 30.6
KXG19878 Sorghum vacuole 28.25 30.48
EER97174 Sorghum vacuole 32.52 30.48
EER97501 Sorghum vacuole 31.91 30.37
EES06163 Sorghum vacuole 29.47 29.41
EER88640 Sorghum extracellular, plasma membrane, vacuole 29.88 29.22
EER96754 Sorghum endoplasmic reticulum, extracellular, plasma membrane 27.64 26.56
EER89096 Sorghum plasma membrane, vacuole 26.02 26.34
OQU84087 Sorghum endoplasmic reticulum, vacuole 27.24 26.33
KXG19867 Sorghum golgi 29.27 25.62
EES14825 Sorghum plastid 27.64 25.05
EER89099 Sorghum plastid 24.19 22.8
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10UniProt:A0A1B6PEH1InterPro:Aspartic_peptidase_A1GO:GO:0003674GO:GO:0003824
GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0016787
GO:GO:0019538InterPro:IPR021109InterPro:IPR033121EnsemblPlants:KXG24092ProteinID:KXG24092ProteinID:KXG24092.1
InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF308
InterPro:Peptidase_aspartic_dom_sfEnsemblPlantsGene:SORBI_3008G184400SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_N
UniParc:UPI00081ADB2CSEG:seg::::
Description
hypothetical protein
Coordinates
chr8:+:61883282..61884960
Molecular Weight (calculated)
51433.1 Da
IEP (calculated)
7.953
GRAVY (calculated)
0.074
Length
492 amino acids
Sequence
(BLAST)
001: MQAMAWSSLA GLLLLLLLAA CSDDTIAVVG VANKPVEYEY HNFLASPLSP HTYTAPAAAA AMPSSSSALQ VRLVHRDSFA VNASAADLLA RRLQRDMRRA
101: AWIITKAATP ADPENGTVVT GAPTSGEYIA KITVGTPYEN DSSFEALLSP DMGSDVTWLQ CMPCFRCYHQ PGPVYNRLKS SSASDVGCYA PACRALGSSG
201: GCVQFLNECQ YKVEYGDGSS SAGDFGVETL TFPPGVRVPG VAIGCGSDNQ GLFPAPAAGI LGLGRGSLSF PSQIAGRYGR SFSYCLAGQG TGGRSSTLTF
301: GSGASATTTT TTPPSFTPML TNSRMYTFYY VGLVGISVGG VRVRGVTESD LRLDPSTGHG GVIVDSGTAV TRLSGPAYAA FRDAFRVAAV KELGWPSPGG
401: PFAFFDTCYS SVRGRVMKKV PAVSMHFAGG VEVKLPPQNY LIPVDSNKGT MCFAFAGSGD RGVSIIGNIQ LQGFRVVYDV DGQRVGFAPN SC
Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.