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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d017867_P001 Maize golgi, vacuole 89.24 88.49
Zm00001d051692_P001 Maize endoplasmic reticulum, plasma membrane 83.33 84.04
Zm00001d017864_P001 Maize plastid 89.45 81.85
HORVU0Hr1G016890.2 Barley plastid 65.19 66.17
TraesCS6D01G263700.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 67.09 53.81
EES07336 Sorghum vacuole 49.16 50.0
EES07335 Sorghum vacuole 47.47 48.91
GSMUA_Achr3P04040_001 Banana mitochondrion 38.61 48.8
EER88303 Sorghum vacuole 48.1 48.61
EER89658 Sorghum vacuole 47.26 48.28
EES03312 Sorghum extracellular 47.47 48.08
EES05617 Sorghum endoplasmic reticulum, vacuole 46.84 47.64
EER88307 Sorghum endoplasmic reticulum, extracellular, vacuole 45.57 46.45
GSMUA_Achr3P04020_001 Banana vacuole 38.61 46.21
GSMUA_Achr3P04060_001 Banana vacuole 38.4 45.73
OQU76307 Sorghum endoplasmic reticulum, extracellular, vacuole 44.73 45.2
EES06163 Sorghum vacuole 46.2 44.42
KXG19878 Sorghum vacuole 42.62 44.3
KRH46246 Soybean cytosol 27.43 41.8
EER96952 Sorghum mitochondrion 42.19 41.58
EER96951 Sorghum endoplasmic reticulum 42.62 41.39
VIT_04s0008g07080.t01 Wine grape extracellular 36.92 40.51
EER88640 Sorghum extracellular, plasma membrane, vacuole 42.83 40.36
CDX85746 Canola vacuole 40.3 40.04
CDY40117 Canola extracellular, vacuole 40.3 40.04
KRH46245 Soybean nucleus 40.51 39.83
Bra028568.1-P Field mustard vacuole 40.08 39.83
AT5G10770.1 Thale cress vacuole 39.66 39.66
VIT_04s0008g07110.t01 Wine grape extracellular 40.08 39.5
KRH46242 Soybean vacuole 40.3 39.38
KRG98688 Soybean nucleus 40.08 38.78
KRH46241 Soybean nucleus, vacuole 39.87 38.73
CDX69804 Canola vacuole 38.82 38.66
CDY70207 Canola plastid, vacuole 37.76 37.92
CDX97058 Canola cytosol, extracellular, nucleus 38.82 37.47
AT5G10760.1 Thale cress vacuole 36.29 37.07
CDX97054 Canola extracellular, plastid, vacuole 36.92 37.0
EER89096 Sorghum plasma membrane, vacuole 37.76 36.83
CDX97055 Canola cytosol, plastid, vacuole 32.28 36.52
OQU84087 Sorghum endoplasmic reticulum, vacuole 39.03 36.35
OQU76292 Sorghum plasma membrane, plastid, vacuole 37.34 36.34
OQU82570 Sorghum endoplasmic reticulum, vacuole 35.44 36.05
Bra009007.1-P Field mustard plastid, vacuole 32.91 35.86
OQU76291 Sorghum vacuole 35.44 35.74
KRH73276 Soybean cytosol 30.8 35.7
CDY72573 Canola plastid, vacuole 32.7 35.63
EES07349 Sorghum vacuole 34.39 35.59
CDY40116 Canola extracellular 35.87 35.49
PGSC0003DMT400059566 Potato extracellular 36.29 35.46
KRH73277 Soybean extracellular 34.18 35.14
CDX85747 Canola extracellular, vacuole 35.02 34.73
Bra028569.1-P Field mustard extracellular 35.02 34.73
Solyc08g067100.2.1 Tomato extracellular, plastid 36.29 34.33
EER89099 Sorghum plastid 37.34 33.91
KRH73176 Soybean extracellular, vacuole 32.91 33.77
EER96754 Sorghum endoplasmic reticulum, extracellular, plasma membrane 36.29 33.59
EES14825 Sorghum plastid 37.13 32.41
EES02514 Sorghum endoplasmic reticulum, vacuole 34.6 32.22
KXG22664 Sorghum extracellular, plastid, vacuole 33.97 32.14
KXG33265 Sorghum vacuole 30.17 31.43
OQU92922 Sorghum vacuole 32.49 31.43
EES01017 Sorghum mitochondrion, plastid 33.97 31.08
KXG19867 Sorghum golgi 36.5 30.78
KXG24092 Sorghum vacuole 31.86 30.69
KXG24090 Sorghum extracellular 31.65 30.3
EES16428 Sorghum extracellular 30.8 29.55
OQU79707 Sorghum vacuole 31.22 29.42
EER97501 Sorghum vacuole 31.65 29.01
EER97174 Sorghum vacuole 32.07 28.95
CDX69805 Canola cytosol 32.7 27.19
Bra009006.1-P Field mustard plasma membrane, plastid, vacuole 39.24 18.16
GSMUA_Achr3P04070_001 Banana nucleus 43.67 16.91
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10EntrezGene:8077726InterPro:Aspartic_peptidase_A1UniProt:C5XZU3InterPro:CND41-like
EnsemblPlants:EES07353ProteinID:EES07353ProteinID:EES07353.1GO:GO:0003674GO:GO:0003824GO:GO:0004190
GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0009056GO:GO:0016787
GO:GO:0019538GO:GO:0030163InterPro:IPR021109InterPro:IPR033121InterPro:PEPTIDASE_A1PFAM:PF14541
PFAM:PF14543PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF290InterPro:Peptidase_aspartic_dom_sfEnsemblPlantsGene:SORBI_3004G258400
SUPFAM:SSF50630unigene:Sbi.21337SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_NTMHMM:TMhelix
UniParc:UPI0001A85B71RefSeq:XP_002454377.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr4:-:60402907..60406802
Molecular Weight (calculated)
48268.9 Da
IEP (calculated)
7.990
GRAVY (calculated)
0.146
Length
474 amino acids
Sequence
(BLAST)
001: MSSPVVRRAL LLSLICAGAL GFLPCSHGAA VAPGYVTVSA ARFRPSSTCS SLDPVAQRRR NGTSAVLRLT HKHGPCAPSR ASSLATPSVA DTLRADQRRA
101: EYILRRVSGR GTPQLWDSKA EAATATVPAN WGFNIGTLNY VVTVSLGTPG VAQTLEVDTG SDLSWVQCTP CAAPACYSQK DPLFDPAQSS SYAAVPCGGP
201: VCGGLGIYAS SCSAAQCGYV VSYGDGSKTT GVYSSDTLTL SPNDAVRGFF FGCGHAQSGF TGNDGLLGLG REEASLVEQT AGTYGGVFSY CLPTRPSTTG
301: YLTLGGPSGA APPGFSTTQL LSSPNAATYY VVMLTGISVG GQQLSVPSSV FAGGTVVDTG TVITRLPPTA YAALRSAFRS GMASYGYPSA PATGILDTCY
401: NFSGYGTVTL PNVALTFSGG ATVTLGADGI LSFGCLAFAP SGSDGGMAIL GNVQQRSFEV RIDGTSVGFK PSSC
Best Arabidopsis Sequence Match ( AT5G10770.1 )
(BLAST)
001: MSINRNLLNI IIILCICLNL GCNDGAQERE TDSHTIQVSS LLPSSSSSCV LSPRASTTKS SLHVTHRHGT CSRLNNGKAT SPDHVEILRL DQARVNSIHS
101: KLSKKLATDH VSESKSTDLP AKDGSTLGSG NYIVTVGLGT PKNDLSLIFD TGSDLTWTQC QPCVRTCYDQ KEPIFNPSKS TSYYNVSCSS AACGSLSSAT
201: GNAGSCSASN CIYGIQYGDQ SFSVGFLAKE KFTLTNSDVF DGVYFGCGEN NQGLFTGVAG LLGLGRDKLS FPSQTATAYN KIFSYCLPSS ASYTGHLTFG
301: SAGISRSVKF TPISTITDGT SFYGLNIVAI TVGGQKLPIP STVFSTPGAL IDSGTVITRL PPKAYAALRS SFKAKMSKYP TTSGVSILDT CFDLSGFKTV
401: TIPKVAFSFS GGAVVELGSK GIFYVFKISQ VCLAFAGNSD DSNAAIFGNV QQQTLEVVYD GAGGRVGFAP NGCS
Arabidopsis Description
Aspartyl protease family protein At5g10770 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J6]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.