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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • plastid 3
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d001835_P001 Maize vacuole 89.91 90.3
TraesCS2A01G554000.1 Wheat plastid 71.46 74.16
TraesCS2D01G560800.1 Wheat extracellular 74.68 73.26
TraesCS2A01G593900.1 Wheat extracellular, vacuole 73.82 72.88
TraesCS2B01G590400.1 Wheat extracellular 74.03 72.63
TraesCS2B01G590200.1 Wheat extracellular, vacuole 74.03 72.33
Bra035823.1-P Field mustard cytosol 50.0 67.15
GSMUA_AchrUn_... Banana extracellular 58.58 62.47
KRG90588 Soybean extracellular, vacuole 56.01 55.18
KRH36168 Soybean endoplasmic reticulum, extracellular, vacuole 56.01 54.95
VIT_10s0071g00770.t01 Wine grape extracellular 56.44 54.91
AT3G20015.1 Thale cress endoplasmic reticulum, vacuole 54.94 54.47
KRH40917 Soybean extracellular, vacuole 48.28 53.83
CDY24567 Canola extracellular, vacuole 45.49 53.67
CDY25371 Canola vacuole 45.71 53.65
PGSC0003DMT400005606 Potato nucleus 51.93 51.93
Solyc04g008850.1.1 Tomato extracellular 53.0 51.57
PGSC0003DMT400065088 Potato extracellular 52.36 50.94
Os04t0677100-00 Rice vacuole 50.86 47.49
EES02514 Sorghum endoplasmic reticulum, vacuole 45.49 41.65
KXG33265 Sorghum vacuole 36.7 37.58
KXG22664 Sorghum extracellular, plastid, vacuole 40.34 37.52
EES01017 Sorghum mitochondrion, plastid 39.48 35.52
EES07353 Sorghum extracellular, vacuole 36.05 35.44
EER89658 Sorghum vacuole 34.76 34.91
EES03312 Sorghum extracellular 34.33 34.19
EES07336 Sorghum vacuole 34.12 34.12
EER88303 Sorghum vacuole 34.33 34.12
KXG24092 Sorghum vacuole 35.62 33.74
EES07335 Sorghum vacuole 33.26 33.7
OQU76307 Sorghum endoplasmic reticulum, extracellular, vacuole 33.91 33.69
EER96952 Sorghum mitochondrion 34.76 33.68
OQU92922 Sorghum vacuole 35.41 33.67
EER88307 Sorghum endoplasmic reticulum, extracellular, vacuole 33.48 33.55
EES05617 Sorghum endoplasmic reticulum, vacuole 33.05 33.05
KXG24090 Sorghum extracellular 34.76 32.73
OQU76292 Sorghum plasma membrane, plastid, vacuole 34.12 32.65
KXG19878 Sorghum vacuole 31.55 32.24
EES06163 Sorghum vacuole 33.91 32.05
EES16428 Sorghum extracellular 33.69 31.78
EER96951 Sorghum endoplasmic reticulum 33.26 31.76
EER88640 Sorghum extracellular, plasma membrane, vacuole 34.12 31.61
EES07349 Sorghum vacuole 30.9 31.44
OQU79707 Sorghum vacuole 33.05 30.62
EER97501 Sorghum vacuole 33.48 30.17
OQU76291 Sorghum vacuole 30.04 29.79
EER97174 Sorghum vacuole 33.48 29.71
EER96754 Sorghum endoplasmic reticulum, extracellular, plasma membrane 30.47 27.73
EER89096 Sorghum plasma membrane, vacuole 28.54 27.37
EES14825 Sorghum plastid 31.12 26.7
OQU84087 Sorghum endoplasmic reticulum, vacuole 28.76 26.33
KXG19867 Sorghum golgi 30.69 25.44
EER89099 Sorghum plastid 26.39 23.56
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10UniProt:A0A1Z5RFN2InterPro:Aspartic_peptidase_A1GO:GO:0003674GO:GO:0003824
GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0016787
GO:GO:0019538InterPro:IPR021109InterPro:IPR033121EnsemblPlants:OQU82570ProteinID:OQU82570ProteinID:OQU82570.1
InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF265
InterPro:Peptidase_aspartic_dom_sfEnsemblPlantsGene:SORBI_3006G266800SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_N
TMHMM:TMhelixUniParc:UPI000B8BA77DSEG:seg:::
Description
hypothetical protein
Coordinates
chr6:-:60029522..60030937
Molecular Weight (calculated)
48106.8 Da
IEP (calculated)
5.049
GRAVY (calculated)
0.172
Length
466 amino acids
Sequence
(BLAST)
001: MHAAAATKLL LVFVFTSMVI IPHASSLRFH YINHHNLTTK TSTTSSSTSA HRSRDRRPSF ALVRRDAVTG ATYPSPRHAV LDLVSRDNAR AEYLASRLSP
101: AYQPTDFFGS ESKVVSGLDE GSGEYFVRVG IGSPPTEQYL VVDSGSDVIW VQCKPCLECY AQADPLFDPA SSATFSAVSC GSAICRTLRT SGCGDSGGCE
201: YEVSYGDGSY TKGTLALETL TLGGTAVEGV AIGCGHRNRG LFVGAAGLLG LGWGPMSLVG QLGGAAGGAF SYCLASRGGS GSGAADAAGS LVLGRSEAVP
301: EGAVWVPLAP SFYYVGVSGI GVGDERLPLQ DGLFQLTEDG GGGVVMDTGT AVTRLPQEAY AALRDAFVGA VGALPRAPGV SLLDTCYDLS GYTSVRVPTV
401: SFYFDGAATL TLPARNLLLE VDGGIYCLAF APSSSGLSIL GNIQQEGIQI TVDSANGYIG FGPATC
Best Arabidopsis Sequence Match ( AT3G20015.1 )
(BLAST)
001: MLLPLFFFFL HLHLHLSSSS SISFPDFQII DVLQPPLTVT ATLPDFNNTH FSDESSSKYT LRLLHRDRFP SVTYRNHHHR LHARMRRDTD RVSAILRRIS
101: GKVIPSSDSR YEVNDFGSDI VSGMDQGSGE YFVRIGVGSP PRDQYMVIDS GSDMVWVQCQ PCKLCYKQSD PVFDPAKSGS YTGVSCGSSV CDRIENSGCH
201: SGGCRYEVMY GDGSYTKGTL ALETLTFAKT VVRNVAMGCG HRNRGMFIGA AGLLGIGGGS MSFVGQLSGQ TGGAFGYCLV SRGTDSTGSL VFGREALPVG
301: ASWVPLVRNP RAPSFYYVGL KGLGVGGVRI PLPDGVFDLT ETGDGGVVMD TGTAVTRLPT AAYVAFRDGF KSQTANLPRA SGVSIFDTCY DLSGFVSVRV
401: PTVSFYFTEG PVLTLPARNF LMPVDDSGTY CFAFAASPTG LSIIGNIQQE GIQVSFDGAN GFVGFGPNVC
Arabidopsis Description
ASPG2Protein ASPARTIC PROTEASE IN GUARD CELL 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE3]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.