Factsheet for PGSC0003DMT400005606

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035823.1-P	Field mustard	cytosol	58.37	78.39
PGSC0003DMT400065088	Potato	extracellular	71.03	69.1
VIT_10s0071g00770.t01	Wine grape	extracellular	69.53	67.64
AT3G20015.1	Thale cress	endoplasmic reticulum, vacuole	65.67	65.11
KRH36168	Soybean	endoplasmic reticulum, extracellular, vacuole	66.31	65.05
KRG90588	Soybean	extracellular, vacuole	65.88	64.9
KRH40917	Soybean	extracellular, vacuole	57.08	63.64
CDY24567	Canola	extracellular, vacuole	53.65	63.29
CDY25371	Canola	vacuole	53.86	63.22
GSMUA_AchrUn_...	Banana	extracellular	55.79	59.5
Zm00001d001835_P001	Maize	vacuole	52.79	53.02
TraesCS2A01G554000.1	Wheat	plastid	50.86	52.78
OQU82570	Sorghum	endoplasmic reticulum, vacuole	51.93	51.93
Zm00001d001833_P001	Maize	plastid	49.36	51.45
TraesCS2A01G593900.1	Wheat	extracellular, vacuole	51.29	50.64
TraesCS2B01G590200.1	Wheat	extracellular, vacuole	51.07	49.9
TraesCS2D01G560800.1	Wheat	extracellular	50.86	49.89
TraesCS2B01G590400.1	Wheat	extracellular	50.64	49.68
PGSC0003DMT400000651	Potato	vacuole	44.64	43.33
PGSC0003DMT400048585	Potato	vacuole	41.2	41.65
PGSC0003DMT400033734	Potato	vacuole	41.42	40.04
PGSC0003DMT400014352	Potato	endoplasmic reticulum, vacuole	39.91	38.27
PGSC0003DMT400010420	Potato	endoplasmic reticulum, plastid	39.7	37.68
Os04t0677100-00	Rice	vacuole	35.84	33.47
PGSC0003DMT400036706	Potato	vacuole	29.61	29.11
PGSC0003DMT400059566	Potato	extracellular	30.26	29.07
PGSC0003DMT400074390	Potato	vacuole	27.68	27.51
PGSC0003DMT400095799	Potato	vacuole	30.9	26.87
PGSC0003DMT400091831	Potato	vacuole	30.69	26.14

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A10	InterPro:Aspartic_peptidase_A1	InterPro:CND41-like	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121	UniProt:M0ZQ57	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	EnsemblPlantsGene:PGSC0003DMG400002196	PGSC:PGSC0003DMG400002196	EnsemblPlants:PGSC0003DMT400005606	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF265	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N
UniParc:UPI000295C02B	SEG:seg	:	:	:	:

Description

Aspartic proteinase nepenthesin-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400002196]

Coordinates

chr2:+:5088313..5089909

Molecular Weight (calculated)

50133.6 Da

IEP (calculated)

6.385

GRAVY (calculated)

-0.066

Length

466 amino acids

Sequence
(BLAST)

001: MTFISASASY ESKSTSGHAI PFPTHEHLDV NQAIKESTLI QPPETHDINI VDDDNSRWKL KLLHRDKLPF SHFTDHPHRF QARMKRDIKR VHTLTATTNY
101: DEVKEEEFGG FGSEVISGME QGSGEYFVRI GVGSPVRQQY MVIDAGSDIV WVQCQPCTHC YHQSDPVFDP SLSASFSGVP CSSSLCDRID NSGCHAGRCK
201: YQVMYGDGSY TKGTMALETL TFGRTVIRDV AIGCGHSNHG MFIGAAGLLG LGGGSMSLVG QLGGQTGGAF SYCLVSRGST GSTGSLEFGR EVLPAGAAWV
301: PLIRNPRAPS FYYIGMSGLG VGGARVPIPE DAFRLTEEGD GGVVMDTGTA VTRLPQEAYV AFRDAFAAQT SSLPRAPAMS IFDTCYDLNG FVTVRVPTIS
401: FFLMGGPILT LPARNFLIPV DRKGTFCFAF APSPTRLSII GNIQQEGIQI SIDGANGFVG FGPNIC

Best Arabidopsis Sequence Match ( AT3G20015.1 )
(BLAST)

001: MLLPLFFFFL HLHLHLSSSS SISFPDFQII DVLQPPLTVT ATLPDFNNTH FSDESSSKYT LRLLHRDRFP SVTYRNHHHR LHARMRRDTD RVSAILRRIS
101: GKVIPSSDSR YEVNDFGSDI VSGMDQGSGE YFVRIGVGSP PRDQYMVIDS GSDMVWVQCQ PCKLCYKQSD PVFDPAKSGS YTGVSCGSSV CDRIENSGCH
201: SGGCRYEVMY GDGSYTKGTL ALETLTFAKT VVRNVAMGCG HRNRGMFIGA AGLLGIGGGS MSFVGQLSGQ TGGAFGYCLV SRGTDSTGSL VFGREALPVG
301: ASWVPLVRNP RAPSFYYVGL KGLGVGGVRI PLPDGVFDLT ETGDGGVVMD TGTAVTRLPT AAYVAFRDGF KSQTANLPRA SGVSIFDTCY DLSGFVSVRV
401: PTVSFYFTEG PVLTLPARNF LMPVDDSGTY CFAFAASPTG LSIIGNIQQE GIQVSFDGAN GFVGFGPNVC

Arabidopsis Description

ASPG2Protein ASPARTIC PROTEASE IN GUARD CELL 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE3]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.