Factsheet for PGSC0003DMT400091831

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g045100.1.1	Tomato	vacuole	97.08	96.72
PGSC0003DMT400095799	Potato	vacuole	78.06	79.66
KRH46018	Soybean	vacuole	69.65	68.4
KRG98962	Soybean	vacuole	69.65	68.04
VIT_12s0028g00610.t01	Wine grape	extracellular	67.46	67.58
AT3G59080.1	Thale cress	vacuole	64.35	65.79
KRH73625	Soybean	vacuole	67.46	65.78
CDX67775	Canola	vacuole	64.17	64.17
Bra003363.1-P	Field mustard	vacuole	64.35	64.12
CDX98347	Canola	vacuole	63.44	64.02
AT2G42980.1	Thale cress	vacuole	60.15	62.43
CDY53652	Canola	vacuole	59.23	62.31
CDX79836	Canola	vacuole	59.23	62.07
Bra004734.1-P	Field mustard	vacuole	58.87	61.69
GSMUA_Achr3P03130_001	Banana	vacuole	58.5	61.19
KRG98063	Soybean	vacuole	56.67	57.84
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	55.76	56.48
KRH30714	Soybean	vacuole	55.76	56.17
GSMUA_Achr6P13720_001	Banana	vacuole	54.11	55.53
Os02t0314600-01	Rice	extracellular	50.64	53.89
EER97501	Sorghum	vacuole	50.64	53.58
TraesCS7A01G528000.1	Wheat	vacuole	47.35	52.75
Zm00001d022078_P001	Maize	vacuole	49.18	52.54
Zm00001d006330_P001	Maize	vacuole	48.81	52.35
TraesCS7D01G516100.1	Wheat	vacuole	47.17	52.33
TraesCS7B01G444800.1	Wheat	vacuole	46.98	52.02
TraesCS7B01G445000.1	Wheat	vacuole	48.08	51.98
EER97174	Sorghum	vacuole	49.73	51.81
TraesCS7D01G516400.1	Wheat	vacuole	47.9	51.37
TraesCS7A01G528200.1	Wheat	vacuole	47.71	50.78
KRH14503	Soybean	vacuole	67.46	50.48
HORVU7Hr1G116780.2	Barley	plastid	48.63	48.81
HORVU7Hr1G116810.1	Barley	plastid	25.41	39.04
Zm00001d040433_P001	Maize	cytosol	25.23	38.66
PGSC0003DMT400000651	Potato	vacuole	31.63	36.04
PGSC0003DMT400048585	Potato	vacuole	30.16	35.79
PGSC0003DMT400033734	Potato	vacuole	28.88	32.78
PGSC0003DMT400014352	Potato	endoplasmic reticulum, vacuole	28.15	31.69
PGSC0003DMT400010420	Potato	endoplasmic reticulum, plastid	27.61	30.75
PGSC0003DMT400005606	Potato	nucleus	26.14	30.69
PGSC0003DMT400059566	Potato	extracellular	26.87	30.31
PGSC0003DMT400065088	Potato	extracellular	26.33	30.06
PGSC0003DMT400074390	Potato	vacuole	24.5	28.57
PGSC0003DMT400036706	Potato	vacuole	24.68	28.48

Protein Annotations

EntrezGene:102582436	MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.050	InterPro:Aspartic_peptidase_A1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121	UniProt:M1DNH8	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFAM:PF14543	EnsemblPlantsGene:PGSC0003DMG400041402	PGSC:PGSC0003DMG400041402	EnsemblPlants:PGSC0003DMT400091831	PRINTS:PR00792
PFscan:PS51257	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF250	InterPro:Pepsin-like_plant	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	SignalP:SignalP-TM	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI0002950E6C
RefSeq:XP_006357686.1	SEG:seg	:	:	:	:

Description

Basic 7S globulin 2 small subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400041402]

Coordinates

chr7:+:43090211..43091854

Molecular Weight (calculated)

60485.1 Da

IEP (calculated)

6.085

GRAVY (calculated)

-0.258

Length

547 amino acids

Sequence
(BLAST)

001: MVTKFHFFIL LFIFLFSSGC VVASGGFYSF RNMNSSVSGI VLPEHPSFNG VSSSANSDCN YGVSEKSTTR SIAQELDGSE DVSNQQKEES VKFHLRHRSE
101: KIEAKDSVFR DLSRIQTLHT RIVEKKNQNT NSRLAKSSEK HEIAPAHAPV AAASPPPESL SYELSGKLMA TLESGVSLGS GEYFMDVFVG TPPKHFSLIL
201: DTGSDLNWLQ CVPCYDCFEQ NGPHYDPKDS SSFRNISCHD PRCQFVTSPD PPQPCKSENQ TCPYYYWYGD SSNTTGDFAL ETFTVNLTTP SGSEFRKVED
301: VMFGCGHWNR GLFHGAAGLL GLGRGPLSFA SQLQSLYGHS FSYCLVDRNS NSSVSSKLIF GEDKDLLKHP QLNFTSLVGG KDNPAETFYY VQIKSVIVGG
401: EVLNIPKETW NLSPEGVGGT IIDSGTTLSY FAEPAYEIIK EAFVKKVKSY PIVHDFPILN PCYNVSGVKN VEFPSFGIVF GDGAVWNFPV ENYFIKLEPE
501: DIVCLAILGT PRSALSIIGN YQQQNFHILY DTKRSRLGYA PTRCADA

Best Arabidopsis Sequence Match ( AT3G59080.1 )
(BLAST)

001: MFSKYSFILC LIFFFVTAFS GDSRALAGNN EQKNISGFSG IDFPNPMRFG SASSSTSNDC GFSSPEKEPT KERTGENKTV KFHLKRRETT TTEKATTNSV
101: LELQIRDLTR IQTLHKRVLE KNNQNTVSQK QKKNDKEVVT TTPVASSVEE QAGQLVATLE SGMTLGSGEY FMDVLVGSPP KHFSLILDTG SDLNWIQCLP
201: CYDCFQQNGA FYDPKASASY KNITCNDQRC NLVSSPDPPM PCKSDNQSCP YYYWYGDSSN TTGDFAVETF TVNLTTNGGS SELYNVENMM FGCGHWNRGL
301: FHGAAGLLGL GRGPLSFSSQ LQSLYGHSFS YCLVDRNSDT NVSSKLIFGE DKDLLSHPNL NFTSFVAGKE NLVDTFYYVQ IKSILVAGEV LNIPEETWNI
401: SSDGAGGTII DSGTTLSYFA EPAYEFIKNK IAEKAKGKYP VYRDFPILDP CFNVSGIHNV QLPELGIAFA DGAVWNFPTE NSFIWLNEDL VCLAMLGTPK
501: SAFSIIGNYQ QQNFHILYDT KRSRLGYAPT KCADI

Arabidopsis Description

AT3g59080/F17J16_130 [Source:UniProtKB/TrEMBL;Acc:Q9LYS8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.