Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- plastid 1
- vacuole 6
- plasma membrane 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX98347 | Canola | vacuole | 88.41 | 87.27 |
CDX67775 | Canola | vacuole | 88.97 | 87.02 |
Bra003363.1-P | Field mustard | vacuole | 88.97 | 86.7 |
AT2G42980.1 | Thale cress | vacuole | 72.52 | 73.62 |
PGSC0003DMT400095799 | Potato | vacuole | 64.86 | 64.74 |
Solyc05g016310.1.1 | Tomato | vacuole | 63.55 | 64.64 |
PGSC0003DMT400091831 | Potato | vacuole | 65.79 | 64.35 |
Solyc07g045100.1.1 | Tomato | vacuole | 65.05 | 63.39 |
VIT_12s0028g00610.t01 | Wine grape | extracellular | 64.3 | 63.0 |
KRH46018 | Soybean | vacuole | 64.49 | 61.94 |
KRG98962 | Soybean | vacuole | 64.3 | 61.43 |
KRH73625 | Soybean | vacuole | 63.74 | 60.78 |
GSMUA_Achr3P03130_001 | Banana | vacuole | 54.21 | 55.45 |
KRG98063 | Soybean | vacuole | 53.83 | 53.73 |
GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 52.15 | 51.67 |
TraesCS7D01G516100.1 | Wheat | vacuole | 46.92 | 50.91 |
KRH30714 | Soybean | vacuole | 51.59 | 50.83 |
TraesCS7B01G444800.1 | Wheat | vacuole | 46.73 | 50.61 |
TraesCS7A01G528000.1 | Wheat | vacuole | 46.36 | 50.51 |
GSMUA_Achr6P13720_001 | Banana | vacuole | 50.28 | 50.47 |
EER97501 | Sorghum | vacuole | 48.6 | 50.29 |
Os02t0314600-01 | Rice | extracellular | 47.48 | 49.42 |
TraesCS7D01G516400.1 | Wheat | vacuole | 46.92 | 49.22 |
TraesCS7B01G445000.1 | Wheat | vacuole | 46.36 | 49.01 |
TraesCS7A01G528200.1 | Wheat | vacuole | 46.92 | 48.83 |
Zm00001d022078_P001 | Maize | vacuole | 46.36 | 48.44 |
Zm00001d006330_P001 | Maize | vacuole | 45.61 | 47.84 |
EER97174 | Sorghum | vacuole | 46.36 | 47.24 |
KRH14503 | Soybean | vacuole | 63.93 | 46.79 |
HORVU7Hr1G116780.2 | Barley | plastid | 47.1 | 46.24 |
HORVU7Hr1G116810.1 | Barley | plastid | 24.3 | 36.52 |
Zm00001d040433_P001 | Maize | cytosol | 24.11 | 36.13 |
AT3G61820.1 | Thale cress | extracellular, vacuole | 29.16 | 32.3 |
AT1G25510.1 | Thale cress | vacuole | 29.16 | 32.3 |
AT1G01300.1 | Thale cress | vacuole | 28.79 | 31.75 |
AT5G10770.1 | Thale cress | vacuole | 27.29 | 30.8 |
AT3G18490.1 | Thale cress | plastid | 27.48 | 29.4 |
AT5G10760.1 | Thale cress | vacuole | 25.05 | 28.88 |
AT3G20015.1 | Thale cress | endoplasmic reticulum, vacuole | 25.05 | 28.51 |
AT1G79720.1 | Thale cress | extracellular, golgi, vacuole | 25.23 | 27.89 |
Protein Annotations
MapMan:19.4.3.1 | Gene3D:2.40.70.10 | EntrezGene:825077 | MEROPS:A01.A12 | UniProt:A0A178V8Y2 | ProteinID:AEE79873.1 |
EMBL:AF424562 | ArrayExpress:AT3G59080 | EnsemblPlantsGene:AT3G59080 | RefSeq:AT3G59080 | TAIR:AT3G59080 | RefSeq:AT3G59080-TAIR-G |
EnsemblPlants:AT3G59080.1 | TAIR:AT3G59080.1 | EMBL:AY099818 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | Unigene:At.26307 |
EMBL:BT000326 | ProteinID:CAB86936.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0016787 | GO:GO:0019538 |
GO:GO:0030163 | InterPro:IPR021109 | InterPro:IPR033121 | RefSeq:NP_191467.1 | ProteinID:OAP02649.1 | InterPro:PEPTIDASE_A1 |
PFAM:PF14541 | PFAM:PF14543 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
PO:PO:0001054 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00792 |
ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF250 | InterPro:Pepsin-like_plant | InterPro:Peptidase_aspartic_dom_sf |
UniProt:Q9LYS8 | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | UniParc:UPI00000AC14B |
SEG:seg | : | : | : | : | : |
Description
AT3g59080/F17J16_130 [Source:UniProtKB/TrEMBL;Acc:Q9LYS8]
Coordinates
chr3:+:21836406..21838620
Molecular Weight (calculated)
59245.5 Da
IEP (calculated)
5.330
GRAVY (calculated)
-0.316
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSKYSFILC LIFFFVTAFS GDSRALAGNN EQKNISGFSG IDFPNPMRFG SASSSTSNDC GFSSPEKEPT KERTGENKTV KFHLKRRETT TTEKATTNSV
101: LELQIRDLTR IQTLHKRVLE KNNQNTVSQK QKKNDKEVVT TTPVASSVEE QAGQLVATLE SGMTLGSGEY FMDVLVGSPP KHFSLILDTG SDLNWIQCLP
201: CYDCFQQNGA FYDPKASASY KNITCNDQRC NLVSSPDPPM PCKSDNQSCP YYYWYGDSSN TTGDFAVETF TVNLTTNGGS SELYNVENMM FGCGHWNRGL
301: FHGAAGLLGL GRGPLSFSSQ LQSLYGHSFS YCLVDRNSDT NVSSKLIFGE DKDLLSHPNL NFTSFVAGKE NLVDTFYYVQ IKSILVAGEV LNIPEETWNI
401: SSDGAGGTII DSGTTLSYFA EPAYEFIKNK IAEKAKGKYP VYRDFPILDP CFNVSGIHNV QLPELGIAFA DGAVWNFPTE NSFIWLNEDL VCLAMLGTPK
501: SAFSIIGNYQ QQNFHILYDT KRSRLGYAPT KCADI
101: LELQIRDLTR IQTLHKRVLE KNNQNTVSQK QKKNDKEVVT TTPVASSVEE QAGQLVATLE SGMTLGSGEY FMDVLVGSPP KHFSLILDTG SDLNWIQCLP
201: CYDCFQQNGA FYDPKASASY KNITCNDQRC NLVSSPDPPM PCKSDNQSCP YYYWYGDSSN TTGDFAVETF TVNLTTNGGS SELYNVENMM FGCGHWNRGL
301: FHGAAGLLGL GRGPLSFSSQ LQSLYGHSFS YCLVDRNSDT NVSSKLIFGE DKDLLSHPNL NFTSFVAGKE NLVDTFYYVQ IKSILVAGEV LNIPEETWNI
401: SSDGAGGTII DSGTTLSYFA EPAYEFIKNK IAEKAKGKYP VYRDFPILDP CFNVSGIHNV QLPELGIAFA DGAVWNFPTE NSFIWLNEDL VCLAMLGTPK
501: SAFSIIGNYQ QQNFHILYDT KRSRLGYAPT KCADI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.