Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- plastid 1
- vacuole 6
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010998.1-P | Field mustard | cytosol | 63.77 | 85.79 |
| CDY03848 | Canola | plasma membrane | 86.13 | 85.77 |
| Bra012473.1-P | Field mustard | plasma membrane | 86.34 | 85.63 |
| CDY51131 | Canola | plasma membrane | 76.6 | 84.86 |
| CDY24395 | Canola | plasma membrane | 82.19 | 82.37 |
| VIT_01s0011g03210.t01 | Wine grape | extracellular, vacuole | 64.8 | 63.75 |
| PGSC0003DMT400033734 | Potato | vacuole | 63.15 | 63.28 |
| Solyc05g009680.1.1 | Tomato | vacuole | 62.32 | 62.45 |
| KRH75429 | Soybean | plasma membrane, plastid, vacuole | 61.7 | 61.57 |
| KRH70570 | Soybean | plastid | 61.08 | 60.95 |
| GSMUA_Achr7P11900_001 | Banana | vacuole | 54.45 | 55.25 |
| TraesCS3A01G053600.1 | Wheat | endoplasmic reticulum, vacuole | 55.49 | 52.96 |
| TraesCS3B01G064700.1 | Wheat | endoplasmic reticulum, vacuole | 55.07 | 52.88 |
| EES02514 | Sorghum | endoplasmic reticulum, vacuole | 55.49 | 52.65 |
| Os01t0140100-01 | Rice | plastid | 54.45 | 52.18 |
| Zm00001d039910_P001 | Maize | vacuole | 54.66 | 52.17 |
| AT3G18490.1 | Thale cress | plastid | 53.83 | 52.0 |
| GSMUA_Achr4P24330_001 | Banana | vacuole | 43.89 | 49.42 |
| HORVU3Hr1G009980.3 | Barley | plastid | 52.59 | 48.57 |
| AT1G01300.1 | Thale cress | vacuole | 46.79 | 46.6 |
| AT3G61820.1 | Thale cress | extracellular, vacuole | 46.38 | 46.38 |
| GSMUA_Achr10P... | Banana | plasma membrane, plastid, vacuole | 55.49 | 44.22 |
| AT3G20015.1 | Thale cress | endoplasmic reticulum, vacuole | 41.2 | 42.34 |
| AT5G10760.1 | Thale cress | vacuole | 33.13 | 34.48 |
| AT5G10770.1 | Thale cress | vacuole | 33.13 | 33.76 |
| AT1G79720.1 | Thale cress | extracellular, golgi, vacuole | 29.81 | 29.75 |
| AT2G42980.1 | Thale cress | vacuole | 31.88 | 29.22 |
| AT3G59080.1 | Thale cress | vacuole | 32.3 | 29.16 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | EntrezGene:839137 | MEROPS:A01.A06 | ProteinID:AAG50814.1 | ProteinID:AEE30636.1 |
| EMBL:AK228512 | ArrayExpress:AT1G25510 | EnsemblPlantsGene:AT1G25510 | RefSeq:AT1G25510 | TAIR:AT1G25510 | RefSeq:AT1G25510-TAIR-G |
| EnsemblPlants:AT1G25510.1 | TAIR:AT1G25510.1 | EMBL:AY099724 | InterPro:Aspartic_peptidase_A1 | EMBL:BT000294 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0009056 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 | InterPro:IPR021109 | InterPro:IPR033121 |
| RefSeq:NP_173922.1 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 |
| PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF274 | InterPro:Peptidase_aspartic_dom_sf | UniProt:Q9C6M0 | SUPFAM:SSF50630 |
| SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | UniParc:UPI00000AC338 | SEG:seg | : |
Description
Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9C6M0]
Coordinates
chr1:-:8959087..8961183
Molecular Weight (calculated)
51993.1 Da
IEP (calculated)
4.582
GRAVY (calculated)
-0.016
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPNYSFFFF IFFLTSHSSV FSRILPETST TTTSILNVAD SIHRTKYTSS FRLNQQEEQT HSASSSFSLQ LHSRVSVRGT EHSDYKSLTL ARLNRDTARV
101: KSLITRLDLA INNISKADLK PISTMYTTEE QDIEAPLISG TTQGSGEYFT RVGIGKPARE VYMVLDTGSD VNWLQCTPCA DCYHQTEPIF EPSSSSSYEP
201: LSCDTPQCNA LEVSECRNAT CLYEVSYGDG SYTVGDFATE TLTIGSTLVQ NVAVGCGHSN EGLFVGAAGL LGLGGGLLAL PSQLNTTSFS YCLVDRDSDS
301: ASTVDFGTSL SPDAVVAPLL RNHQLDTFYY LGLTGISVGG ELLQIPQSSF EMDESGSGGI IIDSGTAVTR LQTEIYNSLR DSFVKGTLDL EKAAGVAMFD
401: TCYNLSAKTT VEVPTVAFHF PGGKMLALPA KNYMIPVDSV GTFCLAFAPT ASSLAIIGNV QQQGTRVTFD LANSLIGFSS NKC
101: KSLITRLDLA INNISKADLK PISTMYTTEE QDIEAPLISG TTQGSGEYFT RVGIGKPARE VYMVLDTGSD VNWLQCTPCA DCYHQTEPIF EPSSSSSYEP
201: LSCDTPQCNA LEVSECRNAT CLYEVSYGDG SYTVGDFATE TLTIGSTLVQ NVAVGCGHSN EGLFVGAAGL LGLGGGLLAL PSQLNTTSFS YCLVDRDSDS
301: ASTVDFGTSL SPDAVVAPLL RNHQLDTFYY LGLTGISVGG ELLQIPQSSF EMDESGSGGI IIDSGTAVTR LQTEIYNSLR DSFVKGTLDL EKAAGVAMFD
401: TCYNLSAKTT VEVPTVAFHF PGGKMLALPA KNYMIPVDSV GTFCLAFAPT ASSLAIIGNV QQQGTRVTFD LANSLIGFSS NKC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.