Factsheet for VIT_01s0011g03210.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010998.1-P	Field mustard	cytosol	51.32	70.19
PGSC0003DMT400033734	Potato	vacuole	66.6	67.84
Solyc05g009680.1.1	Tomato	vacuole	65.99	67.22
Bra012473.1-P	Field mustard	plasma membrane	65.17	65.71
KRH75429	Soybean	plasma membrane, plastid, vacuole	64.36	65.29
AT1G25510.1	Thale cress	vacuole	63.75	64.8
CDY03848	Canola	plasma membrane	63.95	64.74
CDY51131	Canola	plasma membrane	57.43	64.68
KRH70570	Soybean	plastid	63.75	64.67
CDY24395	Canola	plasma membrane	62.93	64.11
VIT_17s0000g03990.t01	Wine grape	endoplasmic reticulum, plasma membrane	63.75	63.1
GSMUA_Achr7P11900_001	Banana	vacuole	57.64	59.45
Zm00001d039910_P001	Maize	vacuole	57.43	55.73
EES02514	Sorghum	endoplasmic reticulum, vacuole	57.43	55.4
Os01t0140100-01	Rice	plastid	56.82	55.36
TraesCS3B01G064700.1	Wheat	endoplasmic reticulum, vacuole	55.6	54.27
TraesCS3A01G053600.1	Wheat	endoplasmic reticulum, vacuole	55.19	53.56
GSMUA_Achr4P24330_001	Banana	vacuole	45.21	51.75
HORVU3Hr1G009980.3	Barley	plastid	52.95	49.71
GSMUA_Achr10P...	Banana	plasma membrane, plastid, vacuole	59.06	47.85
VIT_15s0046g00360.t01	Wine grape	extracellular	44.81	44.99
VIT_10s0071g00770.t01	Wine grape	extracellular	42.77	43.84
VIT_04s0008g07080.t01	Wine grape	extracellular	32.59	37.04
VIT_00s1206g00010.t01	Wine grape	plastid	24.24	36.39
VIT_04s0008g07110.t01	Wine grape	extracellular	32.38	33.06
VIT_00s0429g00040.t01	Wine grape	extracellular	19.76	32.77
VIT_12s0028g00610.t01	Wine grape	extracellular	33.4	30.04
VIT_09s0018g01670.t01	Wine grape	vacuole	28.72	29.62

Protein Annotations

EntrezGene:100259452	wikigene:100259452	MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A06	InterPro:Aspartic_peptidase_A1
InterPro:Aspartic_peptidase_AS	ProteinID:CCB50932	ProteinID:CCB50932.1	InterPro:CND41-like	UniProt:F6HFP7	EMBL:FN595752
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109
InterPro:IPR033121	EntrezGene:LOC100259452	wikigene:LOC100259452	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543
ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF274	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-TM	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI00015C7D49	ArrayExpress:VIT_01s0011g03210
EnsemblPlantsGene:VIT_01s0011g03210	EnsemblPlants:VIT_01s0011g03210.t01	unigene:Vvi.10469	RefSeq:XP_002281973	RefSeq:XP_002281973.1	SEG:seg

Description

No Description!

Coordinates

chr1:+:2924829..2926924

Molecular Weight (calculated)

52688.6 Da

IEP (calculated)

4.710

GRAVY (calculated)

-0.075

Length

491 amino acids

Sequence
(BLAST)

001: MAEKGFLLCV LFAFFCTWGV SLVNARRLSL PRTTVLDVSG SIRESLNVLS LNPQYEQMEF QHQERSFPSS SSSSSLTLSL HSRTSIHKSS HKDYKSLVLA
101: RLERDSDRVR SLATRMDLAI AGITKSDLKP VEKELEAEAL ETPLVSGASQ GSGEYFSRVG IGSPPKHVYM VVDTGSDVNW VQCAPCADCY QQADPIFEPS
201: FSSSYAPLTC ETHQCKSLDV SECRNDSCLY EVSYGDGSYT VGDFATETIT LDGSASLNNV AIGCGHDNEG LFVGAAGLLG LGGGSLSFPS QINASSFSYC
301: LVNRDTDSAS TLEFNSPIPS HSVTAPLLRN NQLDTFYYLG MTGIGVGGQM LSIPRSSFEV DESGNGGIIV DSGTAVTRLQ SDVYNSLRDS FVRGTQHLPS
401: TSGVALFDTC YDLSSRSSVE VPTVSFHFPD GKYLALPAKN YLIPVDSAGT FCFAFAPTTS ALSIIGNVQQ QGTRVSYDLS NSLVGFSPNG C

Best Arabidopsis Sequence Match ( AT1G25510.1 )
(BLAST)

001: MSPNYSFFFF IFFLTSHSSV FSRILPETST TTTSILNVAD SIHRTKYTSS FRLNQQEEQT HSASSSFSLQ LHSRVSVRGT EHSDYKSLTL ARLNRDTARV
101: KSLITRLDLA INNISKADLK PISTMYTTEE QDIEAPLISG TTQGSGEYFT RVGIGKPARE VYMVLDTGSD VNWLQCTPCA DCYHQTEPIF EPSSSSSYEP
201: LSCDTPQCNA LEVSECRNAT CLYEVSYGDG SYTVGDFATE TLTIGSTLVQ NVAVGCGHSN EGLFVGAAGL LGLGGGLLAL PSQLNTTSFS YCLVDRDSDS
301: ASTVDFGTSL SPDAVVAPLL RNHQLDTFYY LGLTGISVGG ELLQIPQSSF EMDESGSGGI IIDSGTAVTR LQTEIYNSLR DSFVKGTLDL EKAAGVAMFD
401: TCYNLSAKTT VEVPTVAFHF PGGKMLALPA KNYMIPVDSV GTFCLAFAPT ASSLAIIGNV QQQGTRVTFD LANSLIGFSS NKC

Arabidopsis Description

Eukaryotic aspartyl protease family protein [Source:UniProtKB/TrEMBL;Acc:Q9C6M0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.