Factsheet for VIT_00s1206g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
extracellular 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22390_001	Banana	plastid	55.66	56.35
VIT_00s0429g00040.t01	Wine grape	extracellular	49.85	55.07
HORVU6Hr1G071390.1	Barley	mitochondrion, plastid	15.6	50.0
HORVU6Hr1G071280.1	Barley	plastid	28.44	48.69
KRH11684	Soybean	vacuole	65.14	45.13
KRH36688	Soybean	mitochondrion, vacuole	64.22	43.3
HORVU6Hr1G071270.5	Barley	plastid	52.29	40.24
TraesCS7B01G128000.1	Wheat	plasma membrane, vacuole	54.74	39.69
Os06t0304600-02	Rice	endoplasmic reticulum, vacuole	56.27	39.23
TraesCS7D01G222800.1	Wheat	unclear	54.13	38.56
Zm00001d045836_P001	Maize	extracellular	55.05	38.22
EES07349	Sorghum	vacuole	53.52	38.21
Os02t0720900-01	Rice	nucleus	53.52	38.21
GSMUA_Achr10P...	Banana	vacuole	47.09	38.12
OQU76291	Sorghum	vacuole	54.74	38.09
Zm00001d017869_P001	Maize	plasma membrane	54.13	38.06
TraesCS7A01G219300.1	Wheat	endoplasmic reticulum	53.82	37.93
Zm00001d017866_P002	Maize	extracellular	54.13	37.9
TraesCS6B01G312000.2	Wheat	endoplasmic reticulum, extracellular, vacuole	52.6	36.52
TraesCS6D01G264200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.6	36.52
TraesCS6A01G283700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.6	36.44
GSMUA_Achr3P10950_001	Banana	vacuole	51.99	36.4
VIT_04s0008g07080.t01	Wine grape	extracellular	46.79	35.42
HORVU7Hr1G045580.8	Barley	endoplasmic reticulum	45.87	32.68
VIT_04s0008g07110.t01	Wine grape	extracellular	45.57	30.98
GSMUA_Achr6P36260_001	Banana	plasma membrane, vacuole	52.29	30.92
HORVU6Hr1G071210.4	Barley	vacuole	44.65	30.87
VIT_09s0018g01670.t01	Wine grape	vacuole	39.76	27.31
VIT_15s0046g00360.t01	Wine grape	extracellular	40.67	27.2
VIT_01s0011g03210.t01	Wine grape	extracellular, vacuole	36.39	24.24
VIT_10s0071g00770.t01	Wine grape	extracellular	35.47	24.22
VIT_17s0000g03990.t01	Wine grape	endoplasmic reticulum, plasma membrane	33.95	22.38
VIT_12s0028g00610.t01	Wine grape	extracellular	33.33	19.96

Protein Annotations

EntrezGene:100853296	wikigene:100853296	MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	ProteinID:CCB62938
ProteinID:CCB62938.1	InterPro:CND41-like	UniProt:F6I7L9	EMBL:FN596830	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	EntrezGene:LOC100853296
wikigene:LOC100853296	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PFscan:PS51767	PANTHER:PTHR13683
PANTHER:PTHR13683:SF422	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N	TIGR:TC57402
UniParc:UPI000210AC06	ArrayExpress:VIT_00s1206g00010	EnsemblPlantsGene:VIT_00s1206g00010	EnsemblPlants:VIT_00s1206g00010.t01	unigene:Vvi.11353	RefSeq:XP_003635520
RefSeq:XP_003635520.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:37881841..37883172

Molecular Weight (calculated)

34600.6 Da

IEP (calculated)

8.276

GRAVY (calculated)

0.152

Length

327 amino acids

Sequence
(BLAST)

001: MIVDTGSSLS WLQCKPCVVY CHVQADPLFD PSASKTYKSL SCTSSQCSSL VDATLNNPLC ETSSNVCVYT ASYGDSSYSM GYLSQDLLTL APSQTLPGFV
101: YGCGQDSEGL FGRAAGILGL GRNKLSMLGQ VSSKFGYAFS YCLPTRGGGG FLSIGKASLA GSAYKFTPMT TDPGNPSLYF LRLTAITVGG RALGVAAAQY
201: RVPTIIDSGT VITRLPMSVY TPFQQAFVKI MSSKYARAPG FSILDTCFKG NLKDMQSVPE VRLIFQGGAD LNLRPVNVLL QVDEGLTCLA FAGNNGVAII
301: GNHQQQTFKV AHDISTARIG FATGGCN

Best Arabidopsis Sequence Match ( AT5G10770.1 )
(BLAST)

001: MSINRNLLNI IIILCICLNL GCNDGAQERE TDSHTIQVSS LLPSSSSSCV LSPRASTTKS SLHVTHRHGT CSRLNNGKAT SPDHVEILRL DQARVNSIHS
101: KLSKKLATDH VSESKSTDLP AKDGSTLGSG NYIVTVGLGT PKNDLSLIFD TGSDLTWTQC QPCVRTCYDQ KEPIFNPSKS TSYYNVSCSS AACGSLSSAT
201: GNAGSCSASN CIYGIQYGDQ SFSVGFLAKE KFTLTNSDVF DGVYFGCGEN NQGLFTGVAG LLGLGRDKLS FPSQTATAYN KIFSYCLPSS ASYTGHLTFG
301: SAGISRSVKF TPISTITDGT SFYGLNIVAI TVGGQKLPIP STVFSTPGAL IDSGTVITRL PPKAYAALRS SFKAKMSKYP TTSGVSILDT CFDLSGFKTV
401: TIPKVAFSFS GGAVVELGSK GIFYVFKISQ VCLAFAGNSD DSNAAIFGNV QQQTLEVVYD GAGGRVGFAP NGCS

Arabidopsis Description

Aspartyl protease family protein At5g10770 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.