Factsheet for Zm00001d017869_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

plastid: 22065420
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017866_P002	Maize	extracellular	99.57	99.14
EES07349	Sorghum	vacuole	92.47	93.89
Os02t0720900-01	Rice	nucleus	83.01	84.28
HORVU6Hr1G071280.1	Barley	plastid	34.41	83.77
HORVU6Hr1G071390.1	Barley	mitochondrion, plastid	18.28	83.33
TraesCS6D01G264200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	80.65	79.62
HORVU6Hr1G071270.5	Barley	plastid	72.69	79.53
TraesCS6A01G283700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	80.65	79.45
TraesCS6B01G312000.2	Wheat	endoplasmic reticulum, extracellular, vacuole	79.78	78.77
Zm00001d045836_P001	Maize	extracellular	73.98	73.04
GSMUA_Achr5P22390_001	Banana	plastid	48.6	69.97
GSMUA_Achr10P...	Banana	vacuole	55.05	63.37
GSMUA_Achr3P10950_001	Banana	vacuole	61.72	61.46
HORVU6Hr1G071210.4	Barley	vacuole	59.78	58.77
VIT_00s1206g00010.t01	Wine grape	plastid	38.06	54.13
GSMUA_Achr6P36260_001	Banana	plasma membrane, vacuole	61.29	51.54
VIT_00s0429g00040.t01	Wine grape	extracellular	30.54	47.97
KRH11684	Soybean	vacuole	46.67	45.97
KRH36688	Soybean	mitochondrion, vacuole	46.02	44.12
Zm00001d045855_P001	Maize	vacuole	29.25	37.47
Zm00001d051693_P001	Maize	endoplasmic reticulum, vacuole	36.56	37.12
Zm00001d020887_P001	Maize	vacuole	37.2	36.89
Zm00001d037411_P001	Maize	plastid	32.04	36.25
Zm00001d045852_P001	Maize	plastid	11.83	35.48
Zm00001d045843_P001	Maize	endoplasmic reticulum, extracellular, vacuole	34.41	34.33
Zm00001d051692_P001	Maize	endoplasmic reticulum, plasma membrane	34.62	34.26
Zm00001d020886_P001	Maize	endoplasmic reticulum, vacuole	34.41	33.54
Zm00001d017867_P001	Maize	golgi, vacuole	34.41	33.47
Zm00001d045863_P001	Maize	vacuole	31.61	33.03
Zm00001d045842_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	32.69	32.9
Zm00001d051695_P001	Maize	mitochondrion	37.42	32.77
Zm00001d020536_P001	Maize	extracellular	34.84	32.4
Zm00001d039910_P001	Maize	vacuole	35.05	32.21
Zm00001d045849_P001	Maize	vacuole	32.04	31.77
Zm00001d001833_P001	Maize	plastid	30.54	31.77
Zm00001d037409_P001	Maize	vacuole	32.26	31.51
Zm00001d044390_P001	Maize	plasma membrane	32.69	31.34
Zm00001d017864_P001	Maize	plastid	34.41	30.89
Zm00001d001835_P001	Maize	vacuole	30.75	30.82
Zm00001d045831_P001	Maize	plastid	31.83	30.71
Zm00001d043617_P001	Maize	endoplasmic reticulum, extracellular, vacuole	28.82	29.65
Zm00001d006330_P001	Maize	vacuole	32.26	29.41
Zm00001d050178_P001	Maize	plasma membrane	36.34	28.89
Zm00001d022078_P001	Maize	vacuole	30.97	28.12
Zm00001d035981_P001	Maize	extracellular	27.96	27.03
Zm00001d040433_P001	Maize	cytosol	16.56	21.57
Zm00001d036827_P002	Maize	plasma membrane, vacuole	37.63	16.89

Protein Annotations

EntrezGene:101027224	MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.050	ProteinID:AQK74332.1	InterPro:Aspartic_peptidase_A1
InterPro:Aspartic_peptidase_AS	EMBL:BT066253	EMBL:BT066297	EMBL:BT069274	UniProt:C0PD84	GO:GO:0003674
GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541
PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF329
InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI000194B1DD
EnsemblPlantsGene:Zm00001d017869	EnsemblPlants:Zm00001d017869_P001	EnsemblPlants:Zm00001d017869_T001	SEG:seg	:	:

Description

Aspartyl protease AED1

Coordinates

chr5:+:209156904..209161914

Molecular Weight (calculated)

48072.9 Da

IEP (calculated)

8.065

GRAVY (calculated)

0.137

Length

465 amino acids

Sequence
(BLAST)

001: MALLRLLAIS LLFAVATPVR DIAHDACSSE VKDFQHLNNS SGLHLTLHHP QSPCSPAPLP ADLPFSAVLA HDGARIASLA ARLAKTPSSR PTLLDESRAG
101: SSSSSPDDES LASVPLGPGT SVGVGNYVTR MGLGTPAKSY VMVVDTGSSL TWLQCSPCVV SCHRQSGPVF NPKASSSYAS VSCSAQQCSD LTTATLNPAS
201: CSTSNVCIYQ ASYGDSSFSV GYLSKDTVSF GSTSVPNFYY GCGQDNEGLF GQSAGLIGLA RNKLSLLYQL APSMGYSFSY CLPTSSSSSS GYLSIGSYNP
301: GQYSYTPMAS SSLDDSLYFI KMTGIKVAGK PLSVSSSAYS SLPTIIDSGT VITRLPTGVY SALSKAVAGA MKGTPRASAF SILDTCFQGQ AARLRVPEVT
401: MAFAGGAALK LAARNLLVDV DSATTCLAFA PARSAAIIGN TQQQTFSVVY DVKNSKIGFA AGGCS

Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)

001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA

Arabidopsis Description

APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.