Factsheet for Zm00001d043617_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d015521_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01300.1	Zm00001d015521_P001	AT4G31920.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33265	Sorghum	vacuole	88.27	87.69
TraesCS3A01G287800.1	Wheat	cytosol	53.54	67.79
Os01t0720000-00	Rice	vacuole	64.6	65.47
HORVU3Hr1G068330.1	Barley	plastid, vacuole	62.17	63.72
TraesCS3D01G287600.1	Wheat	vacuole	61.06	61.74
TraesCS3B01G322500.1	Wheat	vacuole	59.51	60.72
Solyc10g009410.1.1	Tomato	extracellular	42.48	41.92
PGSC0003DMT400048585	Potato	vacuole	42.7	41.87
Zm00001d044390_P001	Maize	plasma membrane	44.47	41.44
KRH68920	Soybean	nucleus	41.81	41.0
KRH06457	Soybean	endoplasmic reticulum, vacuole	43.14	40.97
KRG97194	Soybean	endoplasmic reticulum	42.7	40.89
KRH47900	Soybean	nucleus	42.7	40.8
Solyc01g096040.2.1	Tomato	nucleus, plastid	43.36	40.75
PGSC0003DMT400000651	Potato	vacuole	42.92	40.42
VIT_15s0046g00360.t01	Wine grape	extracellular	42.92	39.67
CDY15187	Canola	vacuole	41.81	39.29
CDX90023	Canola	vacuole	41.81	39.29
Bra033271.1-P	Field mustard	vacuole	41.81	39.29
AT1G01300.1	Thale cress	vacuole	42.04	39.18
Bra014420.1-P	Field mustard	vacuole	41.15	38.51
CDY43952	Canola	vacuole	40.71	38.1
CDX89133	Canola	vacuole	40.71	38.1
AT3G61820.1	Thale cress	extracellular, vacuole	40.71	38.1
CDX67868	Canola	vacuole	40.49	37.73
Zm00001d001835_P001	Maize	vacuole	38.72	37.72
Bra003476.1-P	Field mustard	vacuole	39.82	37.11
CDY25081	Canola	vacuole	39.38	36.7
Zm00001d039910_P001	Maize	vacuole	40.49	36.17
Zm00001d001833_P001	Maize	plastid	35.62	36.02
Zm00001d045855_P001	Maize	vacuole	27.88	34.71
GSMUA_Achr3P31640_001	Banana	cytosol	42.26	33.99
Zm00001d045852_P001	Maize	plastid	11.5	33.55
Zm00001d037411_P001	Maize	plastid	29.42	32.36
Zm00001d020887_P001	Maize	vacuole	32.3	31.13
Zm00001d045831_P001	Maize	plastid	33.19	31.12
Zm00001d051692_P001	Maize	endoplasmic reticulum, plasma membrane	32.3	31.06
Zm00001d017867_P001	Maize	golgi, vacuole	32.3	30.54
Zm00001d022078_P001	Maize	vacuole	34.51	30.47
Zm00001d045863_P001	Maize	vacuole	29.87	30.34
Zm00001d006330_P001	Maize	vacuole	34.07	30.2
Zm00001d045836_P001	Maize	extracellular	31.42	30.15
Zm00001d020886_P001	Maize	endoplasmic reticulum, vacuole	31.64	29.98
Zm00001d017869_P001	Maize	plasma membrane	29.65	28.82
Zm00001d017866_P002	Maize	extracellular	29.65	28.69
Zm00001d045843_P001	Maize	endoplasmic reticulum, extracellular, vacuole	29.2	28.33
Zm00001d017864_P001	Maize	plastid	32.3	28.19
Zm00001d045849_P001	Maize	vacuole	28.76	27.72
Zm00001d037409_P001	Maize	vacuole	28.98	27.52
Zm00001d020536_P001	Maize	extracellular	30.09	27.2
Zm00001d045842_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	27.43	26.84
Zm00001d051693_P001	Maize	endoplasmic reticulum, vacuole	26.99	26.64
Zm00001d035981_P001	Maize	extracellular	27.88	26.2
Zm00001d051695_P001	Maize	mitochondrion	28.54	24.29
Zm00001d040433_P001	Maize	cytosol	18.58	23.53
Zm00001d050178_P001	Maize	plasma membrane	28.98	22.39
Zm00001d036827_P002	Maize	plasma membrane, vacuole	31.64	13.8

Protein Annotations

EntrezGene:103651254	MapMan:19.4.3.1	Gene3D:2.40.70.10	UniProt:A0A1D6NDM9	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121	ProteinID:ONM38594.1
InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF338	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	UniParc:UPI0002212F49	EnsemblPlantsGene:Zm00001d043617	EnsemblPlants:Zm00001d043617_P001	EnsemblPlants:Zm00001d043617_T001	SEG:seg

Description

Aspartyl protease family protein 2

Coordinates

chr3:-:205319288..205320646

Molecular Weight (calculated)

48014.3 Da

IEP (calculated)

8.323

GRAVY (calculated)

-0.004

Length

452 amino acids

Sequence
(BLAST)

001: MASPDALPLR FLLVVLVACT ADATQRPTTL HIPVVHRDAV FPPRRGAPPG SFRCRHAAPH TAQLESLHSA TAAADLLRSP VMSGVPFDSG EYFAVIGVGD
101: PPTHALVVID TGSDLIWLQC LPCRRCYRQV TPLYDPRNSK THRRIPCASP QCRGVLRYPG CDARTGGCVY MVVYGDGSAS SGDLATDTLV LPDDTRVHNV
201: TLGCGHDNEG LLASAAGLLG AGRGQLSFPT QLAPAYGHVF SYCLGDRMSR ARNSSSYLVF GRTPELPSTA FTPLRTNPRR PSLYYVDMVG FSVGGERVAG
301: FSNASLALNP ATGRGGVVVD SGTAISRFTR DAYAAVRDAF VSHAAAAGMR RLRNKFSVFD TCYDVHGNGP GTGVRVPSIV LHFAAAADMA LPQANYLIPV
401: VGGDRRTYFC LGLQAADDGL NVLGNVQQQG FGVVFDVERG RIGFTPNGCS GE

Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)

001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA

Arabidopsis Description

APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.