Factsheet for PGSC0003DMT400074390

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 5
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g068550.2.1	Tomato	extracellular	94.88	94.28
PGSC0003DMT400036706	Potato	vacuole	74.2	73.42
Bra035139.1-P	Field mustard	plastid	29.64	64.95
CDX87358	Canola	mitochondrion	52.88	60.49
VIT_09s0018g01670.t01	Wine grape	vacuole	60.98	60.08
KRH47308	Soybean	extracellular	58.85	57.38
KRH09627	Soybean	vacuole	57.36	57.23
KRH44589	Soybean	extracellular, vacuole	58.64	57.05
GSMUA_Achr4P04280_001	Banana	cytosol	31.56	56.27
CDX79338	Canola	vacuole	57.78	55.65
Bra003596.1-P	Field mustard	vacuole	57.57	55.44
CDX67980	Canola	vacuole	57.36	55.24
AT1G79720.1	Thale cress	extracellular, golgi, vacuole	56.72	54.96
KRH57273	Soybean	endoplasmic reticulum, golgi	32.62	53.5
CDX88562	Canola	golgi, vacuole	55.44	53.39
TraesCS5B01G220700.1	Wheat	endoplasmic reticulum	47.76	48.7
HORVU5Hr1G064080.3	Barley	endoplasmic reticulum, golgi	47.97	48.49
GSMUA_Achr5P16410_001	Banana	cytosol	40.72	48.35
Os09t0423500-01	Rice	endoplasmic reticulum, vacuole	48.61	48.2
TraesCS5A01G221900.1	Wheat	endoplasmic reticulum, golgi	47.33	48.05
TraesCS5D01G229700.1	Wheat	endoplasmic reticulum, golgi	47.33	48.05
GSMUA_Achr9P22770_001	Banana	cytosol, golgi, mitochondrion, peroxisome	31.13	47.56
EER96754	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	49.04	44.92
Zm00001d020536_P001	Maize	extracellular	47.12	44.2
Os08t0267300-00	Rice	plasma membrane, vacuole	46.27	41.41
HORVU5Hr1G093290.1	Barley	mitochondrion, vacuole	44.99	41.13
TraesCS5D01G386300.1	Wheat	plastid, vacuole	44.78	40.7
EES14825	Sorghum	plastid	46.91	40.52
TraesCS5B01G379900.1	Wheat	mitochondrion	45.63	38.21
TraesCS5A01G376300.1	Wheat	extracellular, plastid, vacuole	44.78	37.57
Zm00001d050178_P001	Maize	plasma membrane	46.06	36.92
PGSC0003DMT400059566	Potato	extracellular	37.95	36.7
PGSC0003DMT400000651	Potato	vacuole	30.92	30.21
PGSC0003DMT400010420	Potato	endoplasmic reticulum, plastid	31.34	29.94
PGSC0003DMT400048585	Potato	vacuole	29.21	29.72
PGSC0003DMT400033734	Potato	vacuole	30.28	29.46
PGSC0003DMT400065088	Potato	extracellular	29.85	29.23
PGSC0003DMT400014352	Potato	endoplasmic reticulum, vacuole	28.78	27.78
PGSC0003DMT400005606	Potato	nucleus	27.51	27.68
PGSC0003DMT400095799	Potato	vacuole	28.14	24.63
PGSC0003DMT400091831	Potato	vacuole	28.57	24.5

Protein Annotations

EntrezGene:102580497	MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A07	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS
InterPro:CND41-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121
UniProt:M1CTM2	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	EnsemblPlantsGene:PGSC0003DMG400028911	PGSC:PGSC0003DMG400028911
EnsemblPlants:PGSC0003DMT400074390	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF263	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0002965746	RefSeq:XP_006366263.1

Description

Aspartic proteinase nepenthesin-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400028911]

Coordinates

chr6:+:50231943..50235591

Molecular Weight (calculated)

51102.9 Da

IEP (calculated)

6.822

GRAVY (calculated)

-0.080

Length

469 amino acids

Sequence
(BLAST)

001: MSLWPYTVFL LLFILLTSSN ANNEQRLHLK RLQRTHQSNS PSCYSQKSKS ENGATILEMQ HKDYCSGSVT NMNRNHQKQL IVDDDIRVRS IQASIKNIIS
101: GKIETLSQTK IPISSGVKLH SLNYIVTVTL GGRNTTVIVD TGSDLTWVQC QPCRLCYNQP EPLFNPSVSP TYHKVVCNSS VCQTATGNSG QCGNDLQDCN
201: YVVSYGDGSY TRGELGQDHL VLGSTSVENF VFGCGRNNKG LFGLASGLMG LGRSDLSLIS QTFETFGGVF SYCLPSAEAK SSGSLVLGGD SNTSIFNNST
301: PISYTRMLAN PQLVTFYFLN LTGVTIGGVA IQDSGFGKSG MIIDSGTVIT RLPPTIYKAV KAEFLKLFSG YPFKQGVSIL DTCFDLSAYE EVNIPTVKMQ
401: FEGGGEMEVD VTGVLFIVKS DASQVCLALA SLQYDDEIGI IGNYQQKNTR VIYDIKQSQV GFAKETCSF

Best Arabidopsis Sequence Match ( AT1G79720.1 )
(BLAST)

001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV

Arabidopsis Description

At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.