Factsheet for TraesCS5B01G379900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, vacuole
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G376300.1	Wheat	extracellular, plastid, vacuole	94.64	94.81
TraesCS5D01G386300.1	Wheat	plastid, vacuole	87.32	94.77
HORVU5Hr1G093290.1	Barley	mitochondrion, vacuole	86.79	94.74
Os08t0267300-00	Rice	plasma membrane, vacuole	69.29	74.05
EES14825	Sorghum	plastid	70.54	72.74
Zm00001d050178_P001	Maize	plasma membrane	69.82	66.84
TraesCS5B01G220700.1	Wheat	endoplasmic reticulum	43.57	53.04
Bra035139.1-P	Field mustard	plastid	19.29	50.47
VIT_09s0018g01670.t01	Wine grape	vacuole	40.89	48.11
GSMUA_Achr5P16410_001	Banana	cytosol	33.75	47.85
CDX87358	Canola	mitochondrion	34.82	47.56
KRH09627	Soybean	vacuole	38.93	46.38
KRH47308	Soybean	extracellular	39.46	45.95
Bra003596.1-P	Field mustard	vacuole	39.82	45.79
CDX67980	Canola	vacuole	39.82	45.79
PGSC0003DMT400036706	Potato	vacuole	38.75	45.78
KRH44589	Soybean	extracellular, vacuole	39.29	45.64
PGSC0003DMT400074390	Potato	vacuole	38.21	45.63
CDX79338	Canola	vacuole	39.46	45.38
Solyc03g117690.2.1	Tomato	vacuole	38.39	45.17
Solyc06g068550.2.1	Tomato	extracellular	37.86	44.92
AT1G79720.1	Thale cress	extracellular, golgi, vacuole	38.57	44.63
CDX88562	Canola	golgi, vacuole	37.14	42.71
KRH57273	Soybean	endoplasmic reticulum, golgi	20.18	39.51
TraesCS7B01G392500.1	Wheat	plastid	22.32	39.31
TraesCS7B01G128000.1	Wheat	plasma membrane, vacuole	30.36	37.69
TraesCS5B01G258200.1	Wheat	plastid, vacuole	31.07	36.1
TraesCS6B01G312000.2	Wheat	endoplasmic reticulum, extracellular, vacuole	30.18	35.88
TraesCS6B01G312200.1	Wheat	endoplasmic reticulum, vacuole	28.75	35.54
TraesCS7B01G305000.1	Wheat	plastid	31.25	35.43
TraesCS7B01G129200.1	Wheat	vacuole	28.57	34.26
TraesCS7B01G392400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	28.04	34.13
TraesCS2B01G590200.1	Wheat	extracellular, vacuole	28.57	33.54
TraesCS2B01G590400.1	Wheat	extracellular	28.39	33.47
TraesCS7B01G392300.1	Wheat	extracellular	18.21	32.08
TraesCS3B01G322500.1	Wheat	vacuole	25.18	31.83
TraesCS3B01G064700.1	Wheat	endoplasmic reticulum, vacuole	28.21	31.41
TraesCS6B01G312300.1	Wheat	extracellular, vacuole	23.21	30.81
TraesCS7B01G090900.1	Wheat	vacuole	25.89	30.46
TraesCS7B01G090800.1	Wheat	vacuole	25.71	30.25
TraesCS7B01G445000.1	Wheat	vacuole	26.61	29.45
TraesCS7B01G444800.1	Wheat	vacuole	25.71	29.15
TraesCS3B01G244800.1	Wheat	plastid	26.96	28.54
TraesCS7B01G128600.1	Wheat	plastid	23.39	28.17
TraesCS7B01G079000.1	Wheat	extracellular, plasma membrane, vacuole	23.21	26.58

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	ScanProsite:PS00141
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF321	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	InterPro:TAXi_C
InterPro:TAXi_N	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G379900	EnsemblPlants:TraesCS5B01G379900.1	SEG:seg	:

Description

No Description!

Coordinates

chr5B:+:557953533..557955790

Molecular Weight (calculated)

57842.0 Da

IEP (calculated)

9.173

GRAVY (calculated)

0.074

Length

560 amino acids

Sequence
(BLAST)

001: MYTPSVRVRI LSFSRIHVLL SVARLPLPAS SLASLPSLPR ARSTPMAAAS SSSARGRHLL LRLLALLAVA GNAAAAGSGA VVVGKKSAVL SLRELEWGAA
101: ARKIQGRYEQ QSKAQILGGH RKAEGASRAT TVLELKHHSP ATISNQPAGS EGYLSRLLAA DAARAASLQL PRPASIQSRQ AAAQVPLTSG IRFQTLNYVT
201: TIALGGDSSG AAAKLNVIVD TGSDLTWVQC KPCRACYEQR DPLFDPASSA TYAAVPCNAS ACAASLKEAT GAPGFCARGG GGGGSERCYY ALGYGDGSFS
301: RGVLATDTVG LGGANLNGFV FGCGLSNHGL FGGTAGLMGL GRTELSLVSQ TASRFGGVFS YCLPATTSGD SSGSLSLGRD PSSYRNTTPV AYTRMIADPA
401: QPPFYFMNVT GASVGGAAMT ASGLGASNVL IDSGTVISRL APSVYRAVRA EFARQFSAAG YPAAPGFSLL DTCYNLTGHD EVNVPLLTLR LEGGADVTVE
501: AAGMLFMAKK DGSQVCLAMA GLPYEDQTPI IGNYQQKNKR VVYDTVRSGL GFADEDCSFM

Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)

001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA

Arabidopsis Description

APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.