Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS6A01G146200.3 | |
| TraesCS6B01G174400.1 | |
| TraesCS6D01G135500.3 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G01300.1 | TraesCS6A01G146200.3 | AT4G31920.1 | 18642946 |
| AT1G01300.1 | TraesCS6B01G174400.1 | AT4G31920.1 | 18642946 |
| AT1G01300.1 | TraesCS6D01G135500.3 | AT4G31920.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G214100.1 | Wheat | nucleus | 90.93 | 98.57 |
| TraesCS3D01G216700.1 | Wheat | vacuole | 90.17 | 97.55 |
| HORVU3Hr1G052320.1 | Barley | mitochondrion, plasma membrane, plastid, vacuole | 90.93 | 95.44 |
| Os01t0598600-01 | Rice | nucleus | 79.02 | 83.6 |
| Zm00001d044390_P001 | Maize | plasma membrane | 73.91 | 80.62 |
| EES01017 | Sorghum | mitochondrion, plastid | 76.94 | 78.57 |
| Solyc01g096040.2.1 | Tomato | nucleus, plastid | 52.55 | 57.8 |
| PGSC0003DMT400000651 | Potato | vacuole | 52.36 | 57.71 |
| KRH68920 | Soybean | nucleus | 49.15 | 56.4 |
| KRH47900 | Soybean | nucleus | 50.28 | 56.24 |
| KRG97194 | Soybean | endoplasmic reticulum | 50.09 | 56.14 |
| EES16428 | Sorghum | extracellular | 52.36 | 56.07 |
| CDX90023 | Canola | vacuole | 50.85 | 55.93 |
| Bra033271.1-P | Field mustard | vacuole | 50.85 | 55.93 |
| KXG24092 | Sorghum | vacuole | 51.98 | 55.89 |
| CDY15187 | Canola | vacuole | 50.66 | 55.72 |
| VIT_15s0046g00360.t01 | Wine grape | extracellular | 51.23 | 55.42 |
| KRH06457 | Soybean | endoplasmic reticulum, vacuole | 49.72 | 55.25 |
| OQU92922 | Sorghum | vacuole | 50.85 | 54.9 |
| OQU79707 | Sorghum | vacuole | 51.98 | 54.67 |
| KXG24090 | Sorghum | extracellular | 51.04 | 54.55 |
| CDY43952 | Canola | vacuole | 49.72 | 54.45 |
| AT1G01300.1 | Thale cress | vacuole | 49.91 | 54.43 |
| GSMUA_Achr3P31640_001 | Banana | cytosol | 57.66 | 54.27 |
| Bra014420.1-P | Field mustard | vacuole | 49.53 | 54.24 |
| CDX89133 | Canola | vacuole | 49.53 | 54.24 |
| Solyc10g009410.1.1 | Tomato | extracellular | 46.88 | 54.15 |
| CDX67868 | Canola | vacuole | 48.96 | 53.4 |
| AT3G61820.1 | Thale cress | extracellular, vacuole | 48.58 | 53.21 |
| Bra003476.1-P | Field mustard | vacuole | 48.58 | 52.99 |
| PGSC0003DMT400048585 | Potato | vacuole | 46.12 | 52.93 |
| CDY25081 | Canola | vacuole | 47.64 | 51.96 |
| TraesCS3B01G064700.1 | Wheat | endoplasmic reticulum, vacuole | 44.61 | 46.92 |
| TraesCS3B01G322500.1 | Wheat | vacuole | 38.19 | 45.6 |
| TraesCS2B01G590200.1 | Wheat | extracellular, vacuole | 37.05 | 41.09 |
| TraesCS2B01G590400.1 | Wheat | extracellular | 36.11 | 40.21 |
| TraesCS7B01G392500.1 | Wheat | plastid | 22.68 | 37.74 |
| TraesCS7B01G128000.1 | Wheat | plasma membrane, vacuole | 30.62 | 35.92 |
| TraesCS7B01G444800.1 | Wheat | vacuole | 32.89 | 35.22 |
| TraesCS7B01G445000.1 | Wheat | vacuole | 32.7 | 34.19 |
| TraesCS6B01G312000.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.25 | 33.97 |
| TraesCS7B01G392400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 29.11 | 33.48 |
| TraesCS7B01G305000.1 | Wheat | plastid | 31.0 | 33.2 |
| TraesCS5B01G258200.1 | Wheat | plastid, vacuole | 30.25 | 33.2 |
| TraesCS7B01G090800.1 | Wheat | vacuole | 29.3 | 32.56 |
| TraesCS6B01G312200.1 | Wheat | endoplasmic reticulum, vacuole | 27.22 | 31.79 |
| TraesCS7B01G090900.1 | Wheat | vacuole | 28.54 | 31.72 |
| TraesCS5B01G220700.1 | Wheat | endoplasmic reticulum | 27.22 | 31.3 |
| TraesCS7B01G129200.1 | Wheat | vacuole | 27.6 | 31.26 |
| TraesCS7B01G392300.1 | Wheat | extracellular | 18.71 | 31.13 |
| TraesCS7B01G128600.1 | Wheat | plastid | 25.9 | 29.46 |
| TraesCS7B01G079000.1 | Wheat | extracellular, plasma membrane, vacuole | 26.65 | 28.83 |
| TraesCS6B01G312300.1 | Wheat | extracellular, vacuole | 22.68 | 28.44 |
| TraesCS5B01G379900.1 | Wheat | mitochondrion | 28.54 | 26.96 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | InterPro:Aspartic_peptidase_AS | InterPro:CND41-like | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0019538 | InterPro:IPR021109 | InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 |
| PRINTS:PR00792 | ScanProsite:PS00141 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF355 | InterPro:Peptidase_aspartic_dom_sf |
| SUPFAM:SSF50630 | InterPro:TAXi_C | InterPro:TAXi_N | EnsemblPlantsGene:TraesCS3B01G244800 | EnsemblPlants:TraesCS3B01G244800.1 | TIGR:cd05472 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:387886757..387888346
Molecular Weight (calculated)
55049.3 Da
IEP (calculated)
9.013
GRAVY (calculated)
-0.021
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSPANGDDS RTLPFLYTPR HSTPVQHRPT SSSHSPHMPM APPPLLPLSA LLLLLAAASH ASAKPVQIQA LLATPLSPDR VSAPSELARE DDTNVFAGNL
101: AAADDAAAST VRFRVVHRDD FSKNATAAEL LAHRLERDER RAARLSAAAG AANGTRRGGG GVVAPVVSGL AQGSGEYFTK IGVGTPATPA LMVLDTGSDV
201: VWLQCAPCRR CYEQSGQVFD PRRSRSYGAV GCAAPLCRRL DSGGCDLRRS ACLYQVAYGD GSVTAGDFAT ETLTFAGGAR VARVALGCGH DNEGLFVAAA
301: GLLGLGRGSL SFPTQISRRY GRSFSYCLVD RTSSANSASR SSTVTFGSGA LGSTVASSFT PMVKNPRMET FYYVQLIGIS VGGARVPGVA NSDLRLDPSS
401: GRGGVIVDSG TSVTRLARPA YSALRDAFRG AAAGLRLSPG GFSLFDTCYD LSGRKVVKVP TVSMHFAGGA EAALPPENYL IPVDSKGTFC FAFAGTDGGV
501: SIIGNIQQQG FRVVFDGDGQ RVAFVPKGC
101: AAADDAAAST VRFRVVHRDD FSKNATAAEL LAHRLERDER RAARLSAAAG AANGTRRGGG GVVAPVVSGL AQGSGEYFTK IGVGTPATPA LMVLDTGSDV
201: VWLQCAPCRR CYEQSGQVFD PRRSRSYGAV GCAAPLCRRL DSGGCDLRRS ACLYQVAYGD GSVTAGDFAT ETLTFAGGAR VARVALGCGH DNEGLFVAAA
301: GLLGLGRGSL SFPTQISRRY GRSFSYCLVD RTSSANSASR SSTVTFGSGA LGSTVASSFT PMVKNPRMET FYYVQLIGIS VGGARVPGVA NSDLRLDPSS
401: GRGGVIVDSG TSVTRLARPA YSALRDAFRG AAAGLRLSPG GFSLFDTCYD LSGRKVVKVP TVSMHFAGGA EAALPPENYL IPVDSKGTFC FAFAGTDGGV
501: SIIGNIQQQG FRVVFDGDGQ RVAFVPKGC
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.