Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES06387 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G01300.1 | EES06387 | AT4G31920.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES16428 | Sorghum | extracellular | 91.05 | 92.71 |
| OQU92922 | Sorghum | vacuole | 81.71 | 83.88 |
| KXG24090 | Sorghum | extracellular | 79.52 | 80.81 |
| KXG24092 | Sorghum | vacuole | 60.84 | 62.2 |
| TraesCS3A01G214100.1 | Wheat | nucleus | 54.67 | 56.35 |
| TraesCS3D01G216700.1 | Wheat | vacuole | 54.08 | 55.62 |
| HORVU3Hr1G052320.1 | Barley | mitochondrion, plasma membrane, plastid, vacuole | 54.47 | 54.37 |
| Os01t0598600-01 | Rice | nucleus | 53.68 | 54.0 |
| EES01017 | Sorghum | mitochondrion, plastid | 55.27 | 53.67 |
| TraesCS3B01G244800.1 | Wheat | plastid | 54.67 | 51.98 |
| KXG22664 | Sorghum | extracellular, plastid, vacuole | 50.5 | 50.7 |
| Bra033271.1-P | Field mustard | vacuole | 42.94 | 44.91 |
| CDX90023 | Canola | vacuole | 42.94 | 44.91 |
| CDY15187 | Canola | vacuole | 42.94 | 44.91 |
| Solyc01g096040.2.1 | Tomato | nucleus, plastid | 42.94 | 44.91 |
| PGSC0003DMT400000651 | Potato | vacuole | 42.74 | 44.79 |
| AT1G01300.1 | Thale cress | vacuole | 43.14 | 44.74 |
| CDX67868 | Canola | vacuole | 42.35 | 43.92 |
| Bra003476.1-P | Field mustard | vacuole | 42.35 | 43.92 |
| Solyc10g009410.1.1 | Tomato | extracellular | 39.96 | 43.89 |
| KRG97194 | Soybean | endoplasmic reticulum | 40.95 | 43.64 |
| KRH68920 | Soybean | nucleus | 39.96 | 43.6 |
| AT3G61820.1 | Thale cress | extracellular, vacuole | 41.75 | 43.48 |
| CDX89133 | Canola | vacuole | 41.55 | 43.27 |
| Bra014420.1-P | Field mustard | vacuole | 41.35 | 43.06 |
| KRH47900 | Soybean | nucleus | 40.36 | 42.92 |
| KRH06457 | Soybean | endoplasmic reticulum, vacuole | 40.56 | 42.86 |
| CDY43952 | Canola | vacuole | 40.95 | 42.65 |
| VIT_15s0046g00360.t01 | Wine grape | extracellular | 41.35 | 42.54 |
| PGSC0003DMT400048585 | Potato | vacuole | 38.97 | 42.52 |
| CDY25081 | Canola | vacuole | 40.95 | 42.47 |
| EES02514 | Sorghum | endoplasmic reticulum, vacuole | 40.16 | 39.69 |
| GSMUA_Achr3P31640_001 | Banana | cytosol | 43.54 | 38.97 |
| KXG33265 | Sorghum | vacuole | 34.99 | 38.68 |
| OQU82570 | Sorghum | endoplasmic reticulum, vacuole | 30.62 | 33.05 |
| EER88303 | Sorghum | vacuole | 30.02 | 32.2 |
| EES07349 | Sorghum | vacuole | 29.22 | 32.1 |
| OQU76291 | Sorghum | vacuole | 29.62 | 31.7 |
| EES07353 | Sorghum | extracellular, vacuole | 29.42 | 31.22 |
| EER96951 | Sorghum | endoplasmic reticulum | 30.02 | 30.94 |
| EES07336 | Sorghum | vacuole | 28.63 | 30.9 |
| EES03312 | Sorghum | extracellular | 28.63 | 30.77 |
| OQU76292 | Sorghum | plasma membrane, plastid, vacuole | 29.62 | 30.6 |
| EES07335 | Sorghum | vacuole | 27.83 | 30.43 |
| EER97501 | Sorghum | vacuole | 31.21 | 30.37 |
| EER88307 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 28.03 | 30.32 |
| KXG19878 | Sorghum | vacuole | 27.44 | 30.26 |
| EER96952 | Sorghum | mitochondrion | 28.63 | 29.94 |
| EER97174 | Sorghum | vacuole | 31.01 | 29.71 |
| OQU76307 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 27.63 | 29.64 |
| EER89658 | Sorghum | vacuole | 27.24 | 29.53 |
| EER88640 | Sorghum | extracellular, plasma membrane, vacuole | 28.63 | 28.63 |
| EES05617 | Sorghum | endoplasmic reticulum, vacuole | 26.44 | 28.54 |
| EES06163 | Sorghum | vacuole | 27.83 | 28.4 |
| EER96754 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 27.44 | 26.95 |
| EES14825 | Sorghum | plastid | 27.44 | 25.41 |
| OQU84087 | Sorghum | endoplasmic reticulum, vacuole | 25.45 | 25.15 |
| EER89096 | Sorghum | plasma membrane, vacuole | 24.25 | 25.1 |
| KXG19867 | Sorghum | golgi | 25.25 | 22.6 |
| EER89099 | Sorghum | plastid | 22.47 | 21.65 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | UniProt:A0A1Z5R7L5 | InterPro:Aspartic_peptidase_A1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0016787 |
| GO:GO:0019538 | InterPro:IPR021109 | InterPro:IPR033121 | EnsemblPlants:OQU79707 | ProteinID:OQU79707 | ProteinID:OQU79707.1 |
| InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF308 |
| InterPro:Peptidase_aspartic_dom_sf | EnsemblPlantsGene:SORBI_3008G184500 | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N |
| UniParc:UPI000B8B996D | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:61889446..61891131
Molecular Weight (calculated)
52062.5 Da
IEP (calculated)
6.688
GRAVY (calculated)
0.085
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSCIAGLL LLLAARSAAA AVGLATPVEY QYHSYAVTPL SPHAHSSPEA AEDGAHAHQE DMAASSSSAM HVRLLHRDSF AVNATGAELL ARRLQRDELR
101: AAWIISTAAA NGTPPPDVVG LSTGRGLVAP VVSRAPTSGD YIAKIAVGTP AVEALLALDT ASDLTWLQCQ PCRRCYPQSG PVFDPRHSTS YGEMNYDAPD
201: CQALGRSGGG DAKRGTCIYT VLYGDGDGHG STSTSVGDLV EETLTFAGGV RQAYLSIGCG HDNKGLFGAP AAGILGLSRG QISIPHQIAF LGYNASFSYC
301: LVDFISGPGS PSSTLTFGAG AVDTSPPASF TPTVLNQNMP TFYYVRLIGV SVGGVRVPGV TERDLQLDPY TGHGGVILDS GTTVTRLARP AYTAFRDAFR
401: AAATGLGQVS TGGPSGLFDT CYTVGGRAGV KVPAVSMHFA GGVELSLQPK NYLITVDSRG TVCFAFAGTG DRSVSVIGNI LQQGFRVVYD IGGQRVGFAP
501: NSC
101: AAWIISTAAA NGTPPPDVVG LSTGRGLVAP VVSRAPTSGD YIAKIAVGTP AVEALLALDT ASDLTWLQCQ PCRRCYPQSG PVFDPRHSTS YGEMNYDAPD
201: CQALGRSGGG DAKRGTCIYT VLYGDGDGHG STSTSVGDLV EETLTFAGGV RQAYLSIGCG HDNKGLFGAP AAGILGLSRG QISIPHQIAF LGYNASFSYC
301: LVDFISGPGS PSSTLTFGAG AVDTSPPASF TPTVLNQNMP TFYYVRLIGV SVGGVRVPGV TERDLQLDPY TGHGGVILDS GTTVTRLARP AYTAFRDAFR
401: AAATGLGQVS TGGPSGLFDT CYTVGGRAGV KVPAVSMHFA GGVELSLQPK NYLITVDSRG TVCFAFAGTG DRSVSVIGNI LQQGFRVVYD IGGQRVGFAP
501: NSC
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.