Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES06387 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G01300.1 | EES06387 | AT4G31920.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU79707 | Sorghum | vacuole | 92.71 | 91.05 |
| OQU92922 | Sorghum | vacuole | 82.59 | 83.27 |
| KXG24090 | Sorghum | extracellular | 79.55 | 79.39 |
| KXG24092 | Sorghum | vacuole | 64.17 | 64.43 |
| TraesCS3A01G214100.1 | Wheat | nucleus | 56.07 | 56.76 |
| TraesCS3D01G216700.1 | Wheat | vacuole | 55.67 | 56.24 |
| Os01t0598600-01 | Rice | nucleus | 55.47 | 54.8 |
| HORVU3Hr1G052320.1 | Barley | mitochondrion, plasma membrane, plastid, vacuole | 55.67 | 54.56 |
| EES01017 | Sorghum | mitochondrion, plastid | 56.28 | 53.67 |
| TraesCS3B01G244800.1 | Wheat | plastid | 56.07 | 52.36 |
| KXG22664 | Sorghum | extracellular, plastid, vacuole | 52.43 | 51.7 |
| Solyc01g096040.2.1 | Tomato | nucleus, plastid | 45.34 | 46.57 |
| CDY15187 | Canola | vacuole | 45.14 | 46.36 |
| PGSC0003DMT400000651 | Potato | vacuole | 44.94 | 46.25 |
| CDX90023 | Canola | vacuole | 44.94 | 46.15 |
| Bra033271.1-P | Field mustard | vacuole | 44.94 | 46.15 |
| AT1G01300.1 | Thale cress | vacuole | 44.94 | 45.77 |
| KRH68920 | Soybean | nucleus | 42.51 | 45.55 |
| Bra003476.1-P | Field mustard | vacuole | 44.53 | 45.36 |
| CDX67868 | Canola | vacuole | 44.53 | 45.36 |
| AT3G61820.1 | Thale cress | extracellular, vacuole | 43.93 | 44.93 |
| CDX89133 | Canola | vacuole | 43.93 | 44.93 |
| KRG97194 | Soybean | endoplasmic reticulum | 42.91 | 44.92 |
| Solyc10g009410.1.1 | Tomato | extracellular | 41.5 | 44.76 |
| Bra014420.1-P | Field mustard | vacuole | 43.72 | 44.72 |
| KRH06457 | Soybean | endoplasmic reticulum, vacuole | 42.51 | 44.12 |
| CDY43952 | Canola | vacuole | 43.12 | 44.1 |
| KRH47900 | Soybean | nucleus | 42.11 | 43.97 |
| CDY25081 | Canola | vacuole | 43.12 | 43.92 |
| PGSC0003DMT400048585 | Potato | vacuole | 40.89 | 43.82 |
| VIT_15s0046g00360.t01 | Wine grape | extracellular | 43.12 | 43.56 |
| GSMUA_Achr3P31640_001 | Banana | cytosol | 45.95 | 40.39 |
| KXG33265 | Sorghum | vacuole | 36.64 | 39.78 |
| EES02514 | Sorghum | endoplasmic reticulum, vacuole | 40.89 | 39.69 |
| OQU82570 | Sorghum | endoplasmic reticulum, vacuole | 31.78 | 33.69 |
| EER88303 | Sorghum | vacuole | 31.38 | 33.05 |
| OQU76291 | Sorghum | vacuole | 30.16 | 31.7 |
| EES07349 | Sorghum | vacuole | 29.35 | 31.66 |
| OQU76292 | Sorghum | plasma membrane, plastid, vacuole | 30.77 | 31.21 |
| EER88307 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 29.35 | 31.18 |
| EES07336 | Sorghum | vacuole | 29.35 | 31.12 |
| KXG19878 | Sorghum | vacuole | 28.54 | 30.92 |
| EES07353 | Sorghum | extracellular, vacuole | 29.55 | 30.8 |
| EES03312 | Sorghum | extracellular | 29.15 | 30.77 |
| EER96951 | Sorghum | endoplasmic reticulum | 30.16 | 30.53 |
| EES07335 | Sorghum | vacuole | 28.34 | 30.43 |
| EER97501 | Sorghum | vacuole | 31.78 | 30.37 |
| EER97174 | Sorghum | vacuole | 32.19 | 30.29 |
| OQU76307 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 28.74 | 30.28 |
| EER96952 | Sorghum | mitochondrion | 29.35 | 30.15 |
| EER89658 | Sorghum | vacuole | 28.14 | 29.96 |
| EES06163 | Sorghum | vacuole | 28.95 | 29.01 |
| EES05617 | Sorghum | endoplasmic reticulum, vacuole | 27.13 | 28.76 |
| EER88640 | Sorghum | extracellular, plasma membrane, vacuole | 29.15 | 28.63 |
| EER96754 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 27.53 | 26.56 |
| OQU84087 | Sorghum | endoplasmic reticulum, vacuole | 26.72 | 25.93 |
| EER89096 | Sorghum | plasma membrane, vacuole | 24.9 | 25.31 |
| EES14825 | Sorghum | plastid | 27.73 | 25.23 |
| KXG19867 | Sorghum | golgi | 26.52 | 23.31 |
| EER89099 | Sorghum | plastid | 22.67 | 21.46 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | EntrezGene:8065222 | InterPro:Aspartic_peptidase_A1 | UniProt:C5YSW1 | EnsemblPlants:EES16428 |
| ProteinID:EES16428 | ProteinID:EES16428.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0030163 | InterPro:IPR021109 | InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 |
| PFscan:PS51767 | PANTHER:PTHR13683 | PANTHER:PTHR13683:SF308 | InterPro:Peptidase_aspartic_dom_sf | EnsemblPlantsGene:SORBI_3008G184000 | SUPFAM:SSF50630 |
| SignalP:SignalP-noTM | InterPro:TAXi_C | InterPro:TAXi_N | UniParc:UPI0001A8820E | RefSeq:XP_002442590.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:+:61861187..61862696
Molecular Weight (calculated)
51320.9 Da
IEP (calculated)
7.005
GRAVY (calculated)
0.127
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSCIAGLL LLLAACADDT AVVGLATPVE YEYHSYVVTP LSPHPYSAPA AADDNFSVSS SSALHIHLLH RDSFAVNATA AELLARRLQR DELRAAWIIS
101: KAAANGTPPP VVGLSTGRGL VAPVVSRAPT SGEYMAKIAV GTPAVQALLA LDTASDLTWL QCQPCRRCYP QSGPVFDPRH STSYGEMNYD APDCQALGRS
201: GGGDAKRGTC IYTVQYGDGH GSTSTSVGDL VEETLTFAGG VRQAYLSIGC GHDNKGLFGA PAAGILGLGR GQISIPHQIA FLGYNASFSY CLVDFISGPG
301: SPSSTLTFGA GAVDTSPPAS FTPTVLNQNM PTFYYVRLIG VSVGGVRVPG VTERDLQLDP YTGRGGVILD SGTTVTRLAR PAYVAFRDAF RAAATSLGQV
401: STGGPSGLFD TCYTVGGRAG VKVPAVSMHF AGGVEVSLQP KNYLIPVDSR GTVCFAFAGT GDRSVSVIGN ILQQGFRVVY DLAGQRVGFA PNNC
101: KAAANGTPPP VVGLSTGRGL VAPVVSRAPT SGEYMAKIAV GTPAVQALLA LDTASDLTWL QCQPCRRCYP QSGPVFDPRH STSYGEMNYD APDCQALGRS
201: GGGDAKRGTC IYTVQYGDGH GSTSTSVGDL VEETLTFAGG VRQAYLSIGC GHDNKGLFGA PAAGILGLGR GQISIPHQIA FLGYNASFSY CLVDFISGPG
301: SPSSTLTFGA GAVDTSPPAS FTPTVLNQNM PTFYYVRLIG VSVGGVRVPG VTERDLQLDP YTGRGGVILD SGTTVTRLAR PAYVAFRDAF RAAATSLGQV
401: STGGPSGLFD TCYTVGGRAG VKVPAVSMHF AGGVEVSLQP KNYLIPVDSR GTVCFAFAGT GDRSVSVIGN ILQQGFRVVY DLAGQRVGFA PNNC
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.