Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES06387 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G01300.1 | EES06387 | AT4G31920.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES16428 | Sorghum | extracellular | 83.27 | 82.59 |
| OQU79707 | Sorghum | vacuole | 83.88 | 81.71 |
| KXG24090 | Sorghum | extracellular | 82.04 | 81.21 |
| KXG24092 | Sorghum | vacuole | 63.67 | 63.41 |
| TraesCS3A01G214100.1 | Wheat | nucleus | 54.9 | 55.12 |
| TraesCS3D01G216700.1 | Wheat | vacuole | 54.49 | 54.6 |
| Os01t0598600-01 | Rice | nucleus | 55.51 | 54.4 |
| HORVU3Hr1G052320.1 | Barley | mitochondrion, plasma membrane, plastid, vacuole | 55.1 | 53.57 |
| EES01017 | Sorghum | mitochondrion, plastid | 55.51 | 52.51 |
| TraesCS3B01G244800.1 | Wheat | plastid | 54.9 | 50.85 |
| KXG22664 | Sorghum | extracellular, plastid, vacuole | 51.22 | 50.1 |
| PGSC0003DMT400000651 | Potato | vacuole | 45.92 | 46.88 |
| Solyc01g096040.2.1 | Tomato | nucleus, plastid | 45.92 | 46.78 |
| KRH68920 | Soybean | nucleus | 43.27 | 45.99 |
| Solyc10g009410.1.1 | Tomato | extracellular | 42.45 | 45.41 |
| CDY15187 | Canola | vacuole | 44.49 | 45.32 |
| CDX90023 | Canola | vacuole | 44.49 | 45.32 |
| Bra033271.1-P | Field mustard | vacuole | 44.49 | 45.32 |
| AT1G01300.1 | Thale cress | vacuole | 44.49 | 44.95 |
| KRG97194 | Soybean | endoplasmic reticulum | 43.27 | 44.92 |
| KRH47900 | Soybean | nucleus | 43.06 | 44.61 |
| AT3G61820.1 | Thale cress | extracellular, vacuole | 43.88 | 44.51 |
| PGSC0003DMT400048585 | Potato | vacuole | 41.84 | 44.47 |
| CDX67868 | Canola | vacuole | 43.88 | 44.33 |
| Bra003476.1-P | Field mustard | vacuole | 43.88 | 44.33 |
| CDX89133 | Canola | vacuole | 43.67 | 44.31 |
| Bra014420.1-P | Field mustard | vacuole | 43.67 | 44.31 |
| VIT_15s0046g00360.t01 | Wine grape | extracellular | 43.88 | 43.97 |
| KRH06457 | Soybean | endoplasmic reticulum, vacuole | 42.65 | 43.91 |
| CDY43952 | Canola | vacuole | 43.27 | 43.89 |
| CDY25081 | Canola | vacuole | 42.65 | 43.09 |
| EES02514 | Sorghum | endoplasmic reticulum, vacuole | 41.84 | 40.27 |
| GSMUA_Achr3P31640_001 | Banana | cytosol | 45.71 | 39.86 |
| KXG33265 | Sorghum | vacuole | 36.53 | 39.34 |
| OQU82570 | Sorghum | endoplasmic reticulum, vacuole | 33.67 | 35.41 |
| EER88303 | Sorghum | vacuole | 31.22 | 32.62 |
| EES07353 | Sorghum | extracellular, vacuole | 31.43 | 32.49 |
| EES07336 | Sorghum | vacuole | 30.2 | 31.76 |
| EES03312 | Sorghum | extracellular | 30.2 | 31.62 |
| EER89658 | Sorghum | vacuole | 29.39 | 31.03 |
| EES07349 | Sorghum | vacuole | 28.78 | 30.79 |
| EES07335 | Sorghum | vacuole | 28.78 | 30.65 |
| EER88307 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 28.98 | 30.54 |
| KXG19878 | Sorghum | vacuole | 28.16 | 30.26 |
| OQU76307 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 28.78 | 30.06 |
| EER88640 | Sorghum | extracellular, plasma membrane, vacuole | 30.82 | 30.02 |
| EER97501 | Sorghum | vacuole | 31.63 | 29.98 |
| OQU76291 | Sorghum | vacuole | 28.57 | 29.79 |
| EES06163 | Sorghum | vacuole | 29.8 | 29.61 |
| OQU76292 | Sorghum | plasma membrane, plastid, vacuole | 29.39 | 29.57 |
| EER97174 | Sorghum | vacuole | 31.63 | 29.52 |
| EER96951 | Sorghum | endoplasmic reticulum | 29.39 | 29.51 |
| EER96952 | Sorghum | mitochondrion | 28.37 | 28.9 |
| EES05617 | Sorghum | endoplasmic reticulum, vacuole | 26.94 | 28.33 |
| EER96754 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 28.37 | 27.15 |
| EER89096 | Sorghum | plasma membrane, vacuole | 25.1 | 25.31 |
| OQU84087 | Sorghum | endoplasmic reticulum, vacuole | 26.12 | 25.15 |
| EES14825 | Sorghum | plastid | 27.55 | 24.86 |
| KXG19867 | Sorghum | golgi | 26.53 | 23.13 |
| EER89099 | Sorghum | plastid | 23.06 | 21.65 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | EntrezGene:8054350 | UniProt:A0A1Z5SAH2 | InterPro:Aspartic_peptidase_A1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR021109 | InterPro:IPR033121 | EnsemblPlants:OQU92922 | ProteinID:OQU92922 |
| ProteinID:OQU92922.1 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PFscan:PS51767 | PANTHER:PTHR13683 |
| PANTHER:PTHR13683:SF308 | InterPro:Peptidase_aspartic_dom_sf | EnsemblPlantsGene:SORBI_3001G438300 | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C |
| InterPro:TAXi_N | UniParc:UPI0001A8323E | RefSeq:XP_002468182.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:-:71661838..71663310
Molecular Weight (calculated)
51210.0 Da
IEP (calculated)
7.693
GRAVY (calculated)
0.131
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLCIAGLL LLLAAHSHAA VVGLATPVEY EYHSYAVTPL SPHAYSAPAA ADDDAQAQED VAASSSTLHI RLLHRDRFAA NATPAQLLAR RLQRDVLRAA
101: WIISKAAANG TPPPVAGLSS ARGFVAPVVS RAPTSGEYIA KIAVGTPGVE ALLALDTASD LTWLQCQPCR RCYPQSGPVF DPRHSTSYRE MSFNAADCQA
201: LGRSGGGDAK RGTCVYTVGY GDGSTTVGDF IEETLTFAGG VRLPRISIGC GHDNKGLFGA PAAGILGLGR GLMSFPNQID HNGTFSYCLV DFLSGPGSLS
301: STLTFGAGAV DTSPPVSFTP TVLNLNMPTF YYVRLTGISV GGVRVPGVTE RDLQLDPYTG RGGVIVDSGT AVTRLARPAY TAFRDAFRAV AVDLGQVSIG
401: GPSGFFDTCY TVGGRGMKKV PTVSMHFAGS VEVKLQPKNY LIPVDSMGTV CFAFAATGDH SVSIIGNIQQ QGFRIVYDIG GRVGFAPNSC
101: WIISKAAANG TPPPVAGLSS ARGFVAPVVS RAPTSGEYIA KIAVGTPGVE ALLALDTASD LTWLQCQPCR RCYPQSGPVF DPRHSTSYRE MSFNAADCQA
201: LGRSGGGDAK RGTCVYTVGY GDGSTTVGDF IEETLTFAGG VRLPRISIGC GHDNKGLFGA PAAGILGLGR GLMSFPNQID HNGTFSYCLV DFLSGPGSLS
301: STLTFGAGAV DTSPPVSFTP TVLNLNMPTF YYVRLTGISV GGVRVPGVTE RDLQLDPYTG RGGVIVDSGT AVTRLARPAY TAFRDAFRAV AVDLGQVSIG
401: GPSGFFDTCY TVGGRGMKKV PTVSMHFAGS VEVKLQPKNY LIPVDSMGTV CFAFAATGDH SVSIIGNIQQ QGFRIVYDIG GRVGFAPNSC
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.