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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
EES06387

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01300.1 EES06387 AT4G31920.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU92922 Sorghum vacuole 81.21 82.04
EES16428 Sorghum extracellular 79.39 79.55
OQU79707 Sorghum vacuole 80.81 79.52
KXG24092 Sorghum vacuole 62.42 62.8
TraesCS3A01G214100.1 Wheat nucleus 54.55 55.33
TraesCS3D01G216700.1 Wheat vacuole 54.34 55.01
Os01t0598600-01 Rice nucleus 54.34 53.8
HORVU3Hr1G052320.1 Barley mitochondrion, plasma membrane, plastid, vacuole 54.55 53.57
EES01017 Sorghum mitochondrion, plastid 55.76 53.28
TraesCS3B01G244800.1 Wheat plastid 54.55 51.04
KXG22664 Sorghum extracellular, plastid, vacuole 50.91 50.3
PGSC0003DMT400000651 Potato vacuole 44.44 45.83
Solyc01g096040.2.1 Tomato nucleus, plastid 44.44 45.74
Solyc10g009410.1.1 Tomato extracellular 42.02 45.41
KRG97194 Soybean endoplasmic reticulum 43.03 45.13
CDX90023 Canola vacuole 43.84 45.11
Bra033271.1-P Field mustard vacuole 43.84 45.11
AT1G01300.1 Thale cress vacuole 44.04 44.95
CDY15187 Canola vacuole 43.64 44.91
PGSC0003DMT400048585 Potato vacuole 41.62 44.69
AT3G61820.1 Thale cress extracellular, vacuole 43.43 44.51
KRH68920 Soybean nucleus 41.41 44.47
CDX67868 Canola vacuole 43.43 44.33
Bra003476.1-P Field mustard vacuole 43.43 44.33
KRH06457 Soybean endoplasmic reticulum, vacuole 42.63 44.33
CDX89133 Canola vacuole 43.03 44.1
KRH47900 Soybean nucleus 42.02 43.97
Bra014420.1-P Field mustard vacuole 42.83 43.89
CDY43952 Canola vacuole 42.63 43.69
VIT_15s0046g00360.t01 Wine grape extracellular 43.03 43.56
CDY25081 Canola vacuole 42.02 42.89
EES02514 Sorghum endoplasmic reticulum, vacuole 41.41 40.27
GSMUA_Achr3P31640_001 Banana cytosol 45.45 40.04
KXG33265 Sorghum vacuole 36.16 39.34
OQU82570 Sorghum endoplasmic reticulum, vacuole 32.73 34.76
EER88303 Sorghum vacuole 30.91 32.62
EES07349 Sorghum vacuole 29.49 31.88
EES07353 Sorghum extracellular, vacuole 30.3 31.65
EER88307 Sorghum endoplasmic reticulum, extracellular, vacuole 29.7 31.61
EER89658 Sorghum vacuole 29.29 31.25
EES03312 Sorghum extracellular 29.49 31.2
EES07336 Sorghum vacuole 29.29 31.12
OQU76291 Sorghum vacuole 29.49 31.06
OQU76307 Sorghum endoplasmic reticulum, extracellular, vacuole 29.29 30.92
EES07335 Sorghum vacuole 28.69 30.87
EER96951 Sorghum endoplasmic reticulum 30.1 30.53
EES06163 Sorghum vacuole 30.3 30.43
OQU76292 Sorghum plasma membrane, plastid, vacuole 29.9 30.39
EER97501 Sorghum vacuole 31.72 30.37
KXG19878 Sorghum vacuole 27.88 30.26
EER97174 Sorghum vacuole 31.92 30.1
EER96952 Sorghum mitochondrion 29.09 29.94
EES05617 Sorghum endoplasmic reticulum, vacuole 27.88 29.61
EER88640 Sorghum extracellular, plasma membrane, vacuole 29.49 29.03
OQU84087 Sorghum endoplasmic reticulum, vacuole 27.27 26.52
EER96754 Sorghum endoplasmic reticulum, extracellular, plasma membrane 27.27 26.37
EER89096 Sorghum plasma membrane, vacuole 25.25 25.72
EES14825 Sorghum plastid 27.27 24.86
KXG19867 Sorghum golgi 26.67 23.49
EER89099 Sorghum plastid 23.43 22.22
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10UniProt:A0A1B6PEG4InterPro:Aspartic_peptidase_A1GO:GO:0003674GO:GO:0003824
GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0016787
GO:GO:0019538InterPro:IPR021109InterPro:IPR033121EnsemblPlants:KXG24090ProteinID:KXG24090ProteinID:KXG24090.1
InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543PFscan:PS51767PANTHER:PTHR13683PANTHER:PTHR13683:SF308
InterPro:Peptidase_aspartic_dom_sfEnsemblPlantsGene:SORBI_3008G184100SUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_CInterPro:TAXi_N
UniParc:UPI00081AD5C0SEG:seg::::
Description
hypothetical protein
Coordinates
chr8:+:61864144..61866235
Molecular Weight (calculated)
51534.4 Da
IEP (calculated)
6.899
GRAVY (calculated)
0.127
Length
495 amino acids
Sequence
(BLAST)
001: MTMASSCILL LLAAAAGLAT PVEYQYHSYA VTPLSPHTYS VPAADDDGAR ARQEDVAVSP SALHVRLLHR DSFAVNATPA QLLARRLQRD ELRAAWIIKA
101: AAPAAAANDT PVVGLSSGGA FVAPVVSRAP TTSGEYMAKI AVGTPAVEAL LAMDTGSDIT WLQCQPCRRC YPQSGPVFDP RHSTSYREMG YDAPDCQALG
201: RSGGGDAKRM TCVYAVGYGD DGSTTVGDFI EETLTFAGGV QVPHMSIGCG HDNKGLFAAP AAGILGLGRG QISCPSQIAA LGYNVTSFSY CLADFFLSSP
301: GRSVSSTLTI GDGAAAGSPP PSFTPTVQNL NMATFYYVRL VGVSVGGVRV PGVTEDDLKL DPYTGRGGVI LDSGTAVTRL ARRAYIAFRD AFRAAAVDLG
401: QVSIGGPSGF FDTCYTMGGR AMKVPTVSMH FAGGVELTLP PKNYLIPVDS MGTVCFAFAG TGDRSVSIIG NIQQQGFRVV YNIGGGRVGF APNSC
Best Arabidopsis Sequence Match ( AT1G01300.1 )
(BLAST)
001: MVGRRKALLF SLCFFFLSLP SFSSLPSFQT LFPNSHSLPC ASPVSFQPDS DSESLLESEF ESGSDSESSS SITLNLDHID ALSSNKTPDE LFSSRLQRDS
101: RRVKSIATLA AQIPGRNVTH APRPGGFSSS VVSGLSQGSG EYFTRLGVGT PARYVYMVLD TGSDIVWLQC APCRRCYSQS DPIFDPRKSK TYATIPCSSP
201: HCRRLDSAGC NTRRKTCLYQ VSYGDGSFTV GDFSTETLTF RRNRVKGVAL GCGHDNEGLF VGAAGLLGLG KGKLSFPGQT GHRFNQKFSY CLVDRSASSK
301: PSSVVFGNAA VSRIARFTPL LSNPKLDTFY YVGLLGISVG GTRVPGVTAS LFKLDQIGNG GVIIDSGTSV TRLIRPAYIA MRDAFRVGAK TLKRAPDFSL
401: FDTCFDLSNM NEVKVPTVVL HFRGADVSLP ATNYLIPVDT NGKFCFAFAG TMGGLSIIGN IQQQGFRVVY DLASSRVGFA PGGCA
Arabidopsis Description
APF2Aspartyl protease family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ3]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.