Factsheet for TraesCS5B01G220700.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G229700.1	Wheat	endoplasmic reticulum, golgi	93.7	93.29
TraesCS5A01G221900.1	Wheat	endoplasmic reticulum, golgi	93.48	93.07
HORVU5Hr1G064080.3	Barley	endoplasmic reticulum, golgi	92.17	91.38
Os09t0423500-01	Rice	endoplasmic reticulum, vacuole	77.17	75.05
Zm00001d020536_P001	Maize	extracellular	79.78	73.4
EER96754	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	80.65	72.46
Bra035139.1-P	Field mustard	plastid	25.65	55.14
GSMUA_Achr5P16410_001	Banana	cytosol	43.7	50.89
CDX87358	Canola	mitochondrion	45.22	50.73
VIT_09s0018g01670.t01	Wine grape	vacuole	50.65	48.95
KRH47308	Soybean	extracellular	50.87	48.65
PGSC0003DMT400074390	Potato	vacuole	48.7	47.76
KRH44589	Soybean	extracellular, vacuole	50.0	47.72
PGSC0003DMT400036706	Potato	vacuole	49.13	47.68
Solyc03g117690.2.1	Tomato	vacuole	48.91	47.27
Solyc06g068550.2.1	Tomato	extracellular	48.48	47.25
KRH09627	Soybean	vacuole	47.61	46.6
Bra003596.1-P	Field mustard	vacuole	48.91	46.2
CDX67980	Canola	vacuole	48.91	46.2
CDX79338	Canola	vacuole	47.61	44.97
AT1G79720.1	Thale cress	extracellular, golgi, vacuole	47.17	44.83
KRH57273	Soybean	endoplasmic reticulum, golgi	27.83	44.76
CDX88562	Canola	golgi, vacuole	46.96	44.35
TraesCS5B01G379900.1	Wheat	mitochondrion	53.04	43.57
TraesCS7B01G392500.1	Wheat	plastid	28.91	41.82
TraesCS5B01G258200.1	Wheat	plastid, vacuole	37.83	36.1
TraesCS7B01G128000.1	Wheat	plasma membrane, vacuole	35.22	35.92
TraesCS7B01G392400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	35.65	35.65
TraesCS6B01G312200.1	Wheat	endoplasmic reticulum, vacuole	33.91	34.44
TraesCS7B01G305000.1	Wheat	plastid	36.96	34.41
TraesCS6B01G312300.1	Wheat	extracellular, vacuole	31.09	33.89
TraesCS6B01G312000.2	Wheat	endoplasmic reticulum, extracellular, vacuole	34.35	33.55
TraesCS7B01G129200.1	Wheat	vacuole	33.91	33.4
TraesCS7B01G392300.1	Wheat	extracellular	23.04	33.33
TraesCS7B01G090900.1	Wheat	vacuole	33.26	32.14
TraesCS2B01G590400.1	Wheat	extracellular	33.04	32.0
TraesCS2B01G590200.1	Wheat	extracellular, vacuole	33.04	31.87
TraesCS7B01G090800.1	Wheat	vacuole	32.17	31.09
TraesCS3B01G064700.1	Wheat	endoplasmic reticulum, vacuole	33.7	30.82
TraesCS3B01G322500.1	Wheat	vacuole	29.57	30.7
TraesCS7B01G128600.1	Wheat	plastid	28.7	28.39
TraesCS7B01G444800.1	Wheat	vacuole	30.0	27.94
TraesCS7B01G079000.1	Wheat	extracellular, plasma membrane, vacuole	29.57	27.81
TraesCS3B01G244800.1	Wheat	plastid	31.3	27.22
TraesCS7B01G445000.1	Wheat	vacuole	29.35	26.68

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:CND41-like	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
InterPro:IPR021109	InterPro:IPR033121	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PFscan:PS51767
PANTHER:PTHR13683	PANTHER:PTHR13683:SF263	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C
InterPro:TAXi_N	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G220700	EnsemblPlants:TraesCS5B01G220700.1	TIGR:cd05472	SEG:seg

Description

No Description!

Coordinates

chr5B:-:394982168..394984063

Molecular Weight (calculated)

47567.3 Da

IEP (calculated)

4.696

GRAVY (calculated)

0.127

Length

460 amino acids

Sequence
(BLAST)

001: MARGGAHVVA AAALLLLLLL AAGGGGVHCL RSRAVSGATV LELRHHASFG PGGRSSRAEE ARGVLASDAA RVSSLQRRIG SYGLIRSSDA ASKLAQVPVT
101: SGAMLRTLNY VATMGIGGGE ATVIVDTASE LTWVQCKPCD ACHDQQEPLF DPSASPSYAA VPCNSSSCDA LRVATGMSGQ ACDQPATCSY ALSYRDGSYS
201: RGVLAHDKLS LAGENIEGFV FGCGTSNQGP FGGTSGLMGL GRSQLSLISQ TMEQFGGVFS YCLPPKESGS SGSLVLGDDS SVYRNSTPIV YTAMVSDPLQ
301: GPFYMVNLTG ITVGGEEVQS PGFSAGGGGR AIVDSGTIIT SLVPSVYAAV RAEFLSQLAE YPQAPPFSIL DTCFDLTGLR EVQVPSLKLA FDGGAEVEVD
401: SKGVLYVVSG DASQVCLALA ALRSEDDTPI IGNYQQKNLR VIFDTAGSQI GFAQETCDYI

Best Arabidopsis Sequence Match ( AT1G79720.1 )
(BLAST)

001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV

Arabidopsis Description

At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.