Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G229700.1 | Wheat | endoplasmic reticulum, golgi | 95.67 | 95.67 |
| TraesCS5B01G220700.1 | Wheat | endoplasmic reticulum | 93.07 | 93.48 |
| HORVU5Hr1G064080.3 | Barley | endoplasmic reticulum, golgi | 91.13 | 90.73 |
| Os09t0423500-01 | Rice | endoplasmic reticulum, vacuole | 73.81 | 72.09 |
| Zm00001d020536_P001 | Maize | extracellular | 77.92 | 72.0 |
| EER96754 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 77.49 | 69.92 |
| Bra035139.1-P | Field mustard | plastid | 24.46 | 52.8 |
| GSMUA_Achr5P16410_001 | Banana | cytosol | 43.72 | 51.14 |
| CDX87358 | Canola | mitochondrion | 44.81 | 50.49 |
| VIT_09s0018g01670.t01 | Wine grape | vacuole | 50.0 | 48.53 |
| KRH47308 | Soybean | extracellular | 49.57 | 47.61 |
| PGSC0003DMT400074390 | Potato | vacuole | 48.05 | 47.33 |
| Solyc06g068550.2.1 | Tomato | extracellular | 48.05 | 47.03 |
| PGSC0003DMT400036706 | Potato | vacuole | 47.84 | 46.62 |
| KRH44589 | Soybean | extracellular, vacuole | 48.48 | 46.47 |
| Solyc03g117690.2.1 | Tomato | vacuole | 47.62 | 46.22 |
| Bra003596.1-P | Field mustard | vacuole | 48.27 | 45.79 |
| CDX67980 | Canola | vacuole | 48.27 | 45.79 |
| KRH09627 | Soybean | vacuole | 46.32 | 45.53 |
| AT1G79720.1 | Thale cress | extracellular, golgi, vacuole | 46.97 | 44.83 |
| CDX79338 | Canola | vacuole | 47.19 | 44.76 |
| CDX88562 | Canola | golgi, vacuole | 46.97 | 44.56 |
| KRH57273 | Soybean | endoplasmic reticulum, golgi | 27.49 | 44.41 |
| TraesCS5A01G376300.1 | Wheat | extracellular, plastid, vacuole | 53.46 | 44.19 |
| TraesCS7A01G489100.1 | Wheat | cytosol, mitochondrion | 32.03 | 39.15 |
| TraesCS5A01G259400.2 | Wheat | mitochondrion | 38.53 | 37.01 |
| TraesCS7A01G219300.1 | Wheat | endoplasmic reticulum | 36.36 | 36.21 |
| TraesCS3A01G287800.1 | Wheat | cytosol | 27.92 | 36.13 |
| TraesCS7A01G222100.1 | Wheat | plastid | 21.21 | 35.9 |
| TraesCS7A01G489200.1 | Wheat | vacuole | 35.71 | 35.87 |
| TraesCS7A01G405600.1 | Wheat | mitochondrion, plastid, vacuole | 37.88 | 35.43 |
| TraesCS7A01G489400.1 | Wheat | endoplasmic reticulum | 35.06 | 35.22 |
| TraesCS6A01G283500.1 | Wheat | unclear | 34.42 | 34.72 |
| TraesCS7A01G489000.1 | Wheat | endoplasmic reticulum, extracellular | 34.2 | 34.65 |
| TraesCS6A01G283400.1 | Wheat | vacuole | 33.77 | 34.29 |
| TraesCS6A01G283700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 34.85 | 34.11 |
| TraesCS7A01G489300.1 | Wheat | endoplasmic reticulum | 33.98 | 33.98 |
| TraesCS5A01G125300.1 | Wheat | extracellular | 11.9 | 33.54 |
| TraesCS7A01G185700.1 | Wheat | mitochondrion, plastid | 31.17 | 33.41 |
| TraesCS2A01G554000.1 | Wheat | plastid | 32.47 | 33.41 |
| TraesCS4A01G439400.1 | Wheat | mitochondrion | 30.52 | 33.18 |
| TraesCS7A01G185800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.55 | 32.84 |
| TraesCS2A01G589700.1 | Wheat | vacuole | 32.9 | 32.83 |
| TraesCS2A01G593900.1 | Wheat | extracellular, vacuole | 33.33 | 32.63 |
| TraesCS7A01G085300.1 | Wheat | vacuole | 32.9 | 32.55 |
| TraesCS7A01G185600.1 | Wheat | vacuole | 32.68 | 32.33 |
| TraesCS3A01G053600.1 | Wheat | endoplasmic reticulum, vacuole | 34.63 | 31.62 |
| TraesCS7A01G052600.1 | Wheat | endoplasmic reticulum | 31.82 | 30.82 |
| TraesCS7A01G218800.1 | Wheat | plastid | 28.57 | 30.48 |
| TraesCS3A01G214100.1 | Wheat | nucleus | 31.6 | 29.92 |
| TraesCS7A01G051300.1 | Wheat | extracellular, plasma membrane, vacuole | 29.44 | 28.69 |
| TraesCS7A01G051700.1 | Wheat | vacuole | 29.0 | 28.33 |
| TraesCS7A01G528200.1 | Wheat | vacuole | 31.17 | 28.02 |
| TraesCS7A01G528000.1 | Wheat | vacuole | 29.65 | 27.9 |
| TraesCS7A01G174100.1 | Wheat | extracellular | 29.22 | 27.72 |
| TraesCS7A01G052800.1 | Wheat | endoplasmic reticulum, vacuole | 29.0 | 27.13 |
Protein Annotations
| MapMan:19.4.3.1 | Gene3D:2.40.70.10 | InterPro:Aspartic_peptidase_A1 | InterPro:CND41-like | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004190 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR021109 | InterPro:IPR033121 | InterPro:PEPTIDASE_A1 | PFAM:PF14541 | PFAM:PF14543 | PFscan:PS51767 |
| PANTHER:PTHR13683 | PANTHER:PTHR13683:SF263 | InterPro:Peptidase_aspartic_dom_sf | SUPFAM:SSF50630 | SignalP:SignalP-noTM | InterPro:TAXi_C |
| InterPro:TAXi_N | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5A01G221900 | EnsemblPlants:TraesCS5A01G221900.1 | TIGR:cd05472 | SEG:seg |
Description
No Description!
Coordinates
chr5A:-:438154080..438156024
Molecular Weight (calculated)
47427.9 Da
IEP (calculated)
4.652
GRAVY (calculated)
0.110
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MARGGARAVA PAALLLLLLL AAGGGVHCLR SRAESGATVL ELRHHASLGS GGRSGSAEEA RGVLASDAAR VSSLQRRIGS YGLIRSSDAA SKLAQVPVTS
101: GARLRTLNYV ATVGIGGGEA TVIVDTASEL TWVQCKPCDA CHDQQEPLFD PSASPSYAAV PCNSSSCDAL RVATGMSGGQ ACDQPAACSY ALSYRDGSYS
201: RGVLAHDRLS LAGEDIEGFV FGCGTSNQGP FGGTSGLMGL GRSPLSLISQ TTEQFGGVFS YCLPPKESGS SGSLVLGDDA SAYRNSTPIV YTAMVTDPLQ
301: GPFYMVNLTG ISVGGEEVQS PGFSAGGGGG GRAIVDSGTI ITSLVPSVYA AVRGEFVRQL AEYPRAPAFS ILDTCFDLTG LREVQVPSLR LAFDGGAEVE
401: VDSKGVLYVV AGDASQVCLA LAALGSEDDT PIIGNYQQKN LRVVFDTAAS QIGFAQETCD YI
101: GARLRTLNYV ATVGIGGGEA TVIVDTASEL TWVQCKPCDA CHDQQEPLFD PSASPSYAAV PCNSSSCDAL RVATGMSGGQ ACDQPAACSY ALSYRDGSYS
201: RGVLAHDRLS LAGEDIEGFV FGCGTSNQGP FGGTSGLMGL GRSPLSLISQ TTEQFGGVFS YCLPPKESGS SGSLVLGDDA SAYRNSTPIV YTAMVTDPLQ
301: GPFYMVNLTG ISVGGEEVQS PGFSAGGGGG GRAIVDSGTI ITSLVPSVYA AVRGEFVRQL AEYPRAPAFS ILDTCFDLTG LREVQVPSLR LAFDGGAEVE
401: VDSKGVLYVV AGDASQVCLA LAALGSEDDT PIIGNYQQKN LRVVFDTAAS QIGFAQETCD YI
001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV
Arabidopsis Description
At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.