Factsheet for PGSC0003DMT400036706

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g117690.2.1	Tomato	vacuole	97.47	97.06
PGSC0003DMT400074390	Potato	vacuole	73.42	74.2
Bra035139.1-P	Field mustard	plastid	31.65	70.09
CDX87358	Canola	mitochondrion	54.85	63.41
VIT_09s0018g01670.t01	Wine grape	vacuole	61.6	61.34
KRH47308	Soybean	extracellular	60.97	60.08
KRH44589	Soybean	extracellular, vacuole	60.55	59.54
KRH09627	Soybean	vacuole	58.65	59.15
Bra003596.1-P	Field mustard	vacuole	60.55	58.93
CDX67980	Canola	vacuole	60.55	58.93
CDX79338	Canola	vacuole	60.55	58.93
AT1G79720.1	Thale cress	extracellular, golgi, vacuole	58.02	56.82
KRH57273	Soybean	endoplasmic reticulum, golgi	33.97	56.29
GSMUA_Achr4P04280_001	Banana	cytosol	31.22	56.27
CDX88562	Canola	golgi, vacuole	56.75	55.24
GSMUA_Achr5P16410_001	Banana	cytosol	42.83	51.39
Os09t0423500-01	Rice	endoplasmic reticulum, vacuole	49.16	49.26
TraesCS5B01G220700.1	Wheat	endoplasmic reticulum	47.68	49.13
HORVU5Hr1G064080.3	Barley	endoplasmic reticulum, golgi	47.26	48.28
GSMUA_Achr9P22770_001	Banana	cytosol, golgi, mitochondrion, peroxisome	31.01	47.88
TraesCS5D01G229700.1	Wheat	endoplasmic reticulum, golgi	46.62	47.84
TraesCS5A01G221900.1	Wheat	endoplasmic reticulum, golgi	46.62	47.84
EER96754	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	49.37	45.7
Zm00001d020536_P001	Maize	extracellular	47.26	44.8
HORVU5Hr1G093290.1	Barley	mitochondrion, vacuole	45.57	42.11
Os08t0267300-00	Rice	plasma membrane, vacuole	45.78	41.41
TraesCS5D01G386300.1	Wheat	plastid, vacuole	44.51	40.89
EES14825	Sorghum	plastid	45.57	39.78
TraesCS5B01G379900.1	Wheat	mitochondrion	45.78	38.75
TraesCS5A01G376300.1	Wheat	extracellular, plastid, vacuole	44.94	38.1
PGSC0003DMT400059566	Potato	extracellular	37.97	37.11
Zm00001d050178_P001	Maize	plasma membrane	44.94	36.41
PGSC0003DMT400000651	Potato	vacuole	31.43	31.04
PGSC0003DMT400048585	Potato	vacuole	29.75	30.59
PGSC0003DMT400010420	Potato	endoplasmic reticulum, plastid	30.8	29.74
PGSC0003DMT400033734	Potato	vacuole	30.17	29.67
PGSC0003DMT400005606	Potato	nucleus	29.11	29.61
PGSC0003DMT400065088	Potato	extracellular	29.75	29.44
PGSC0003DMT400014352	Potato	endoplasmic reticulum, vacuole	28.06	27.37
PGSC0003DMT400095799	Potato	vacuole	28.27	25.0
PGSC0003DMT400091831	Potato	vacuole	28.48	24.68

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	MEROPS:A01.A07	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	InterPro:CND41-like
GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:IPR021109	InterPro:IPR033121	UniProt:M1B435
InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	EnsemblPlantsGene:PGSC0003DMG400014156	PGSC:PGSC0003DMG400014156	EnsemblPlants:PGSC0003DMT400036706
ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF321	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
SignalP:SignalP-TM	InterPro:TAXi_C	InterPro:TAXi_N	UniParc:UPI0002960F63	SEG:seg	:

Description

Aspartic proteinase nepenthesin-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400014156]

Coordinates

chr3:+:57358317..57360129

Molecular Weight (calculated)

51629.6 Da

IEP (calculated)

7.265

GRAVY (calculated)

-0.055

Length

474 amino acids

Sequence
(BLAST)

001: MSLCQYSIVF ALLFVGAFGY GDNELFLPLK TLQKMHHKHN EPSCSSQKSR SENGAIILEM KHKDYCFRSR GDLNKRLQKR LLADDIRVRS IQSNIKKISS
101: KQVEALSQTT TTQIPINSGV TMQTLNYIVT VTLGGRNMTV IVDTGSDLTW VQCQPCRLCY NQPEPLFNPS ISPSFQTVAC NSSACLSLES ATGNSGLCGT
201: NSQTCGYLVS YGDGSYTKGD LGQDHLVLGR TSVDNFVFGC GRNNRGLFGL ASGLMGLGRS DLSLISQTSG VFGGVFSYCL PSTEAESSGS LIFGGDPSVF
301: KNSTPISYTK MVPNPQLFSF YFLNLTGMTI GGVAVQDSSF GKSGFLIDSG TVITRLPPSI YKAVKAEFLK QFSGYPSVPG YSILDTCFDL STYEEVNIPT
401: IKVHFEGDAQ MEVDVAGVFY FVKNDASQVC LALASLQYEG EIGIIGNFQQ RNTRVIYDTK QSQVGFAKET CSFM

Best Arabidopsis Sequence Match ( AT1G79720.1 )
(BLAST)

001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV

Arabidopsis Description

At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.