Factsheet for GSMUA_Achr4P04280_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P22770_001	Banana	cytosol, golgi, mitochondrion, peroxisome	66.92	57.33
Bra035139.1-P	Field mustard	plastid	39.54	48.6
GSMUA_Achr5P16410_001	Banana	cytosol	60.46	40.25
CDX87358	Canola	mitochondrion	54.37	34.88
VIT_09s0018g01670.t01	Wine grape	vacuole	58.56	32.35
Bra003596.1-P	Field mustard	vacuole	59.7	32.24
CDX79338	Canola	vacuole	59.7	32.24
CDX67980	Canola	vacuole	59.32	32.03
Solyc06g068550.2.1	Tomato	extracellular	57.03	31.78
PGSC0003DMT400074390	Potato	vacuole	56.27	31.56
KRH44589	Soybean	extracellular, vacuole	57.41	31.33
PGSC0003DMT400036706	Potato	vacuole	56.27	31.22
Solyc03g117690.2.1	Tomato	vacuole	56.27	31.09
KRH09627	Soybean	vacuole	55.51	31.06
AT1G79720.1	Thale cress	extracellular, golgi, vacuole	57.03	30.99
KRH47308	Soybean	extracellular	56.65	30.98
CDX88562	Canola	golgi, vacuole	55.89	30.18
GSMUA_Achr3P04040_001	Banana	mitochondrion	35.36	24.8
GSMUA_Achr1P19480_001	Banana	vacuole	39.16	24.18
GSMUA_Achr5P22390_001	Banana	plastid	29.66	24.15
GSMUA_Achr7P16890_001	Banana	extracellular, vacuole	38.4	22.9
GSMUA_Achr3P11930_001	Banana	vacuole	38.02	22.88
GSMUA_Achr3P04060_001	Banana	vacuole	33.84	22.36
GSMUA_Achr3P04020_001	Banana	vacuole	33.46	22.22
GSMUA_Achr3P10950_001	Banana	vacuole	35.74	20.13
GSMUA_Achr10P...	Banana	vacuole	27.38	17.82
GSMUA_Achr7P11900_001	Banana	vacuole	29.66	16.39
GSMUA_Achr4P24330_001	Banana	vacuole	26.62	16.32
GSMUA_Achr6P36260_001	Banana	plasma membrane, vacuole	33.08	15.73
GSMUA_AchrUn_...	Banana	extracellular	25.48	15.33
KRH57273	Soybean	endoplasmic reticulum, golgi	16.35	15.04
GSMUA_Achr3P03130_001	Banana	vacuole	28.9	14.53
GSMUA_Achr6P13720_001	Banana	vacuole	28.9	14.26
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	28.9	14.07
GSMUA_Achr3P31640_001	Banana	cytosol	29.28	13.7
GSMUA_Achr10P...	Banana	plasma membrane, plastid, vacuole	29.66	12.87
GSMUA_Achr3P04070_001	Banana	nucleus	39.16	8.42

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G04280_001
EnsemblPlants:GSMUA_Achr4P04280_001	EnsemblPlants:GSMUA_Achr4T04280_001	InterPro:IPR021109	InterPro:IPR033121	UniProt:M0SKZ5	InterPro:PEPTIDASE_A1
PFAM:PF14541	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF263	InterPro:Peptidase_aspartic_dom_sf	SUPFAM:SSF50630
InterPro:TAXi_C	UniParc:UPI000295308B	:	:	:	:

Description

aspartic proteinase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G04280_001]

Coordinates

chr4:+:3361372..3362583

Molecular Weight (calculated)

28742.2 Da

IEP (calculated)

5.119

GRAVY (calculated)

-0.105

Length

263 amino acids

Sequence
(BLAST)

001: MRQHLQSPRS YLKLLIEDEA RVESLQSRIK DPMEMEESTS EAQVPLVSGI KLQTLNYAGV CGADRIEGFI FGCGLRNHGL FGGTSDDPAL YKNSTPVSYT
101: RMVSDPRQAP FYFLNLTGAS IGGVPLDAAG FSNGRTLIDS GTVITRLPPS VYQTLKAEFV RQFSGYPPAP SFSILDTCFN LSAYEEVKVP KVRFGFEGGA
201: EMNVDVTGIF YLVKKDASQV CLAIASLQFD GQVGIIGNYQ QKNQRVVYDT VASRIGFAEE ACS

Best Arabidopsis Sequence Match ( AT1G79720.1 )
(BLAST)

001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV

Arabidopsis Description

At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.