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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole, mitochondrion

Predictor Summary:
  • extracellular 4
  • golgi 4
  • plasma membrane 5
  • endoplasmic reticulum 4
  • vacuole 5
  • mitochondrion 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G386300.1 Wheat plastid, vacuole 94.15 93.6
TraesCS5A01G376300.1 Wheat extracellular, plastid, vacuole 94.93 87.12
TraesCS5B01G379900.1 Wheat mitochondrion 94.74 86.79
Os08t0267300-00 Rice plasma membrane, vacuole 76.02 74.43
EES14825 Sorghum plastid 74.66 70.53
Zm00001d050178_P001 Maize plasma membrane 71.54 62.73
HORVU5Hr1G064080.3 Barley endoplasmic reticulum, golgi 46.78 51.72
Bra035139.1-P Field mustard plastid 20.86 50.0
GSMUA_Achr5P16410_001 Banana cytosol 36.65 47.59
CDX87358 Canola mitochondrion 38.01 47.56
VIT_09s0018g01670.t01 Wine grape vacuole 43.66 47.06
PGSC0003DMT400036706 Potato vacuole 42.11 45.57
KRH09627 Soybean vacuole 41.72 45.53
KRH44589 Soybean extracellular, vacuole 42.69 45.44
KRH47308 Soybean extracellular 42.5 45.32
Bra003596.1-P Field mustard vacuole 42.88 45.17
CDX67980 Canola vacuole 42.88 45.17
PGSC0003DMT400074390 Potato vacuole 41.13 44.99
CDX79338 Canola vacuole 42.69 44.97
Solyc03g117690.2.1 Tomato vacuole 41.72 44.96
AT1G79720.1 Thale cress extracellular, golgi, vacuole 42.11 44.63
Solyc06g068550.2.1 Tomato extracellular 40.94 44.49
CDX88562 Canola golgi, vacuole 40.16 42.3
KRH57273 Soybean endoplasmic reticulum, golgi 21.83 39.16
HORVU5Hr1G072370.1 Barley mitochondrion, vacuole 34.89 36.98
HORVU6Hr1G071270.5 Barley plastid 30.6 36.94
HORVU0Hr1G016890.2 Barley plastid 32.75 35.97
HORVU6Hr1G071190.2 Barley endoplasmic reticulum, vacuole 31.58 35.68
HORVU6Hr1G071280.1 Barley plastid 13.06 35.08
HORVU6Hr1G071390.1 Barley mitochondrion, plastid 6.82 34.31
HORVU7Hr1G045670.1 Barley vacuole 30.6 34.13
HORVU7Hr1G094870.4 Barley plastid 34.7 33.78
HORVU6Hr1G071160.1 Barley vacuole 28.66 32.24
HORVU7Hr1G109730.1 Barley plasma membrane 31.38 32.07
HORVU3Hr1G068330.1 Barley plastid, vacuole 27.49 31.97
HORVU7Hr1G045580.8 Barley endoplasmic reticulum 28.27 31.59
HORVU7Hr1G109750.4 Barley plastid 29.24 31.06
HORVU7Hr1G009380.1 Barley vacuole 29.24 30.3
HORVU3Hr1G052320.1 Barley mitochondrion, plasma membrane, plastid, vacuole 29.63 30.16
HORVU6Hr1G071210.4 Barley vacuole 27.29 29.6
HORVU7Hr1G009410.1 Barley endoplasmic reticulum, vacuole 28.07 29.15
HORVU7Hr1G009420.4 Barley endoplasmic reticulum, vacuole 27.88 28.95
HORVU3Hr1G009980.3 Barley plastid 28.66 28.11
HORVU7Hr1G116780.2 Barley plastid 28.66 26.97
HORVU7Hr1G036020.1 Barley extracellular, plasma membrane, vacuole 25.54 26.68
HORVU7Hr1G009260.2 Barley endoplasmic reticulum 23.0 24.69
HORVU7Hr1G116810.1 Barley plastid 15.01 21.63
Protein Annotations
MapMan:19.4.3.1Gene3D:2.40.70.10InterPro:Aspartic_peptidase_A1InterPro:Aspartic_peptidase_ASInterPro:CND41-likeGO:GO:0003674
GO:GO:0003824GO:GO:0004190GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233
GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:HORVU5Hr1G093290EnsemblPlants:HORVU5Hr1G093290.1InterPro:IPR021109InterPro:IPR033121
UniProt:M0XPK0InterPro:PEPTIDASE_A1PFAM:PF14541PFAM:PF14543ScanProsite:PS00141PFscan:PS51767
PANTHER:PTHR13683PANTHER:PTHR13683:SF321InterPro:Peptidase_aspartic_dom_sfSUPFAM:SSF50630SignalP:SignalP-noTMInterPro:TAXi_C
InterPro:TAXi_NTMHMM:TMhelixUniParc:UPI000294B5A6SEG:seg::
Description
No Description!
Coordinates
chrchr5H:+:591288853..591291658
Molecular Weight (calculated)
53171.3 Da
IEP (calculated)
8.837
GRAVY (calculated)
0.036
Length
513 amino acids
Sequence
(BLAST)
001: MAAASSSSAR GRHLLLRLLA LLAVVGNAAA AGSGAVVVGK KSAVLPLREL EWGAAARKIQ GRYAQQKKAQ ILGEHRKAEG ARRATTVLEL KHHSPATISN
101: QPAGSEGYLS RLLAADAARA ASLQLPRAAS IQSRQAAAQV PLTSGIRFQT LNYVTTIALG KDSSGAAAKL NVIVDTGSDL TWVQCKPCRA CYEQRDPLFD
201: PASSATYAAV PCNASACAAS LKEATGAPGF CAKGGSGERC YYGLGYGDGS FSRGVLATDT VGLGGAKLDA FVFGCGLSNH GLFGGTAGLM GLGRTELSLV
301: SQTASRFGGV FSYCLPATTS GDSTGSLSLG SDPSSYRNTT PVAYTRMIAD PAQPPFYFMN VTGASVGGAA VTASGLGARN VLIDSGTVIT RLAPSVYRAV
401: RAEFARQFTA AGYPAAPAFS LLDTCYNLTG HDEVNVPLLT LRLEGGADMT VEAAGMLFMA KKDGSQVCLA MASLPYEDQT PIIGNYQQKN KRVVYDTVRS
501: GLGFADEDCT YSM
Best Arabidopsis Sequence Match ( AT1G79720.1 )
(BLAST)
001: MFKKATLNLS LAPLLLVFLF LLSCVVHGVD EKKILSVHNN IWSPKKSYEA STSCFSRSLG KGRESTTLEM KHRELCSGKT IDLGKKMRRA LVLDNIRVQS
101: LQLKIKAMTS STTEQSVSET QIPLTSGIKL ESLNYIVTVE LGGKNMSLIV DTGSDLTWVQ CQPCRSCYNQ QGPLYDPSVS SSYKTVFCNS STCQDLVAAT
201: SNSGPCGGNN GVVKTPCEYV VSYGDGSYTR GDLASESILL GDTKLENFVF GCGRNNKGLF GGSSGLMGLG RSSVSLVSQT LKTFNGVFSY CLPSLEDGAS
301: GSLSFGNDSS VYTNSTSVSY TPLVQNPQLR SFYILNLTGA SIGGVELKSS SFGRGILIDS GTVITRLPPS IYKAVKIEFL KQFSGFPTAP GYSILDTCFN
401: LTSYEDISIP IIKMIFQGNA ELEVDVTGVF YFVKPDASLV CLALASLSYE NEVGIIGNYQ QKNQRVIYDT TQERLGIVGE NCRV
Arabidopsis Description
At1g79720 [Source:UniProtKB/TrEMBL;Acc:Q8RX60]
SUBAcon: [extracellular,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.