Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34423 | Canola | nucleus | 95.13 | 94.53 |
| Bra033527.1-P | Field mustard | nucleus | 99.79 | 74.41 |
| CDY09718 | Canola | nucleus | 68.01 | 53.41 |
| CDX90546 | Canola | nucleus | 64.62 | 51.69 |
| CDX92102 | Canola | nucleus | 49.79 | 46.81 |
| CDX95898 | Canola | nucleus | 49.79 | 46.53 |
| CDX75892 | Canola | nucleus | 41.95 | 43.81 |
| CDX82389 | Canola | nucleus | 56.36 | 43.68 |
| CDY52720 | Canola | nucleus | 16.95 | 42.78 |
| CDX73905 | Canola | nucleus | 7.63 | 36.0 |
| Solyc01g065540.2.1 | Tomato | nucleus | 47.88 | 33.38 |
| KRH12005 | Soybean | nucleus | 47.46 | 33.33 |
| PGSC0003DMT400065835 | Potato | nucleus | 47.25 | 33.04 |
| KRH37035 | Soybean | nucleus | 46.61 | 32.69 |
| CDX73907 | Canola | nucleus | 7.2 | 25.19 |
| CDY64566 | Canola | nucleus | 17.37 | 21.81 |
| CDY09419 | Canola | nucleus | 17.16 | 21.49 |
| CDX79963 | Canola | nucleus | 10.38 | 19.84 |
| CDY53674 | Canola | nucleus | 10.38 | 19.76 |
| CDY08579 | Canola | nucleus | 9.96 | 19.42 |
| CDX80940 | Canola | nucleus | 9.75 | 18.85 |
| CDY36273 | Canola | mitochondrion | 9.53 | 18.83 |
| CDY52133 | Canola | nucleus | 9.75 | 18.4 |
| CDY68249 | Canola | nucleus | 16.95 | 18.31 |
| CDX82988 | Canola | nucleus | 9.96 | 18.15 |
| CDX98816 | Canola | nucleus | 9.96 | 18.01 |
| CDX68392 | Canola | nucleus | 9.96 | 17.94 |
| CDY61256 | Canola | nucleus | 10.17 | 17.52 |
| CDY56439 | Canola | nucleus | 10.17 | 17.45 |
| CDY00969 | Canola | nucleus | 10.38 | 17.25 |
| CDX86245 | Canola | nucleus | 9.96 | 17.22 |
| CDX99104 | Canola | nucleus | 10.38 | 16.9 |
| CDY35371 | Canola | nucleus | 19.92 | 16.18 |
| CDY70103 | Canola | nucleus | 19.7 | 16.12 |
| CDY07410 | Canola | nucleus | 17.16 | 15.91 |
| CDY28869 | Canola | nucleus | 16.95 | 15.78 |
| CDY33920 | Canola | nucleus | 14.41 | 15.7 |
| CDY13465 | Canola | nucleus | 17.16 | 15.64 |
| CDX96070 | Canola | nucleus | 16.95 | 15.59 |
| CDY01838 | Canola | nucleus | 16.31 | 15.4 |
| CDX72337 | Canola | nucleus | 16.74 | 15.11 |
| CDY02794 | Canola | nucleus | 15.25 | 15.09 |
| CDY05641 | Canola | nucleus | 14.19 | 15.02 |
| CDX68803 | Canola | nucleus | 15.89 | 14.68 |
| CDX81041 | Canola | nucleus | 17.58 | 14.66 |
| CDX78284 | Canola | nucleus | 17.37 | 14.44 |
| GSMUA_Achr5P16510_001 | Banana | cytosol, nucleus, plastid | 6.57 | 14.35 |
| CDY16482 | Canola | nucleus | 13.35 | 14.32 |
| CDX82391 | Canola | cytosol | 4.45 | 14.19 |
| CDY54632 | Canola | cytosol | 4.45 | 14.19 |
| CDY11437 | Canola | nucleus | 12.5 | 14.05 |
| CDX76652 | Canola | nucleus | 12.29 | 13.84 |
| CDX70016 | Canola | nucleus | 17.37 | 13.67 |
| CDX77263 | Canola | nucleus | 12.92 | 13.56 |
| CDX98997 | Canola | nucleus | 17.16 | 13.52 |
| CDY67763 | Canola | nucleus | 16.74 | 13.3 |
| CDY32725 | Canola | nucleus | 17.37 | 13.16 |
| CDY02793 | Canola | nucleus | 17.16 | 12.94 |
| CDY54630 | Canola | cytosol | 4.24 | 12.9 |
| CDY04335 | Canola | nucleus | 13.98 | 12.5 |
| CDY29358 | Canola | nucleus | 12.5 | 11.68 |
| CDY14053 | Canola | nucleus | 16.31 | 10.29 |
| CDX86925 | Canola | nucleus | 12.92 | 9.01 |
| CDY30695 | Canola | nucleus | 13.77 | 8.63 |
| CDX87845 | Canola | cytosol, extracellular | 1.69 | 5.97 |
| CDY49965 | Canola | mitochondrion | 1.91 | 2.67 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | GO:A0A078H483 | UniProt:A0A078H483 | EnsemblPlants:CDY32209 |
| ProteinID:CDY32209 | ProteinID:CDY32209.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00051639001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 | InterPro:SANT/Myb | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0004EE99C0 |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g17750DBnaA01g17750D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078H483]
Coordinates
chrLK032290:+:3..2108
Molecular Weight (calculated)
51567.8 Da
IEP (calculated)
6.571
GRAVY (calculated)
-0.735
Length
472 amino acids
Sequence
(BLAST)
(BLAST)
001: QHVVRKKRNE WNVSEHSGSV EETGQREDGD NNSSSANNEG SWRGSRKRKE EEVDEQGGDD KEDTSSLKKP RVVWSVELHQ QFVAAVNQLG VDKAVPKKIL
101: EMMNVPGLTR ENVASHLQKY RIYLRRLGGV SQHQGNMNHS FMTGQDPSFG PLSTLNGFDL QALAAAGQLP AQSLAHLQAA GLARPPSLTK PGMSVDQRSI
201: FSFENPKIRH GQMMNSGGGG NKQMNLLHGQ QQLSGGRAVG QNVQSSGMMM PVGGGPSMLQ QQQQVMLSSS VPRRSETSSS SRVLPAAATT QSVVFNNFSS
301: ELPRNSFPLA SAPGISVSYQ EEVNSSDAKG GAGFGNPSYD IFNDYPQQHN NNNDWDLQNI GMVFNSHQDT TTASAAFSSS SSTQRQRAEH VQNHHQQQQL
401: PSQSLNHMNG GGSVRVKSER VAETVTCPPA TTLFQEQYNQ EDLMSALLKQ EGLPLVDNEF DFDGYSFDNI PV
101: EMMNVPGLTR ENVASHLQKY RIYLRRLGGV SQHQGNMNHS FMTGQDPSFG PLSTLNGFDL QALAAAGQLP AQSLAHLQAA GLARPPSLTK PGMSVDQRSI
201: FSFENPKIRH GQMMNSGGGG NKQMNLLHGQ QQLSGGRAVG QNVQSSGMMM PVGGGPSMLQ QQQQVMLSSS VPRRSETSSS SRVLPAAATT QSVVFNNFSS
301: ELPRNSFPLA SAPGISVSYQ EEVNSSDAKG GAGFGNPSYD IFNDYPQQHN NNNDWDLQNI GMVFNSHQDT TTASAAFSSS SSTQRQRAEH VQNHHQQQQL
401: PSQSLNHMNG GGSVRVKSER VAETVTCPPA TTLFQEQYNQ EDLMSALLKQ EGLPLVDNEF DFDGYSFDNI PV
001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQV
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQV
Arabidopsis Description
ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.