Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G049000.1 | Wheat | nucleus | 86.86 | 83.65 |
| TraesCS7A01G146500.1 | Wheat | nucleus | 84.19 | 83.64 |
| TraesCS7D01G148200.1 | Wheat | nucleus | 88.19 | 80.42 |
| HORVU7Hr1G030050.1 | Barley | nucleus | 81.86 | 78.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.95 | 67.67 |
| TraesCS7D01G499700.1 | Wheat | cytosol | 10.48 | 58.88 |
| TraesCS6D01G342200.1 | Wheat | nucleus | 56.41 | 50.22 |
| Solyc07g005140.2.1 | Tomato | nucleus | 36.61 | 33.08 |
| PGSC0003DMT400020233 | Potato | nucleus | 38.1 | 32.39 |
| Solyc12g010330.1.1 | Tomato | nucleus | 37.44 | 31.78 |
| TraesCS6D01G135500.3 | Wheat | nucleus | 33.94 | 31.63 |
| TraesCS7D01G489600.1 | Wheat | nucleus | 25.46 | 30.48 |
| TraesCS7D01G499600.1 | Wheat | nucleus | 24.63 | 29.84 |
| PGSC0003DMT400008290 | Potato | nucleus | 36.61 | 28.46 |
| TraesCS7D01G525900.1 | Wheat | nucleus | 27.12 | 28.15 |
| TraesCS7D01G500600.1 | Wheat | nucleus | 24.79 | 26.09 |
| TraesCS3D01G384500.2 | Wheat | nucleus | 26.62 | 25.68 |
| TraesCS3D01G355500.1 | Wheat | nucleus, plastid | 9.48 | 25.11 |
| TraesCS4D01G239900.1 | Wheat | nucleus | 27.45 | 24.12 |
| TraesCS1D01G257700.1 | Wheat | nucleus | 10.82 | 21.04 |
| TraesCS3D01G531900.1 | Wheat | nucleus | 9.48 | 20.28 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00072 |
| PFAM:PF00249 | PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF37 |
| InterPro:Response_reg_B-typ_pln | InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver |
| TIGRFAMs:TIGR01557 | EnsemblPlantsGene:TraesCS7D01G148000 | EnsemblPlants:TraesCS7D01G148000.1 | TIGR:cd00156 | SEG:seg | : |
Description
No Description!
Coordinates
chr7D:+:94936567..94940188
Molecular Weight (calculated)
66312.9 Da
IEP (calculated)
6.178
GRAVY (calculated)
-0.363
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLDAMMMEA RKGLMERERE RDQFPVGMRV LAVDDDPVCL KVLEVLLRRC QYHVTTTNQA ATALRLLREN KDMFDLVISD VHMPDMDGFK LLELVGLEMD
101: LPVIMLSVNG ETKSVLKGIT HGACDYLLKP VRIEELRNVW QHVVRRKFSN REPNNLDFCK EISKDSYHRL GQATCDRSSD QSNRASKKRK ELHSEEEDEG
201: EDNDDASAAS KKPRVVWSAE LHRKFVAAVN QLGIDKAVPK RILELMNVEK LTRENVASHL QKYRLYLRRL SAVASQQASI AAAFGGRDPF EGLHSYHQPF
301: APSLNPHGLL SGAGAATFEL QDFVPSKAIQ CASSIGAVSH CAGDTNKFNI VSLQDNQQAD LTQGLTTSSL GQPRLQQTWI HQETNDLCSV FSGGAQANTM
401: SGTFQRITSS SLAPEDLLEC TPHIKLGAHP SIGISQQGAL PISDGFSVDK LPLHIPFDGA DTGFLAREPK MDQKGIFSER MNVRVCPSES LIAANNAKCG
501: ASSSGSTMLL PPDTERHSEY LQFGAASNSR HRMDGVREDQ CLNNADFSYD GGAIVPEQTH MDDLGIPKLQ GGFNSSSCNF DGLLNSIIQV ENPHVMTILP
601: L
101: LPVIMLSVNG ETKSVLKGIT HGACDYLLKP VRIEELRNVW QHVVRRKFSN REPNNLDFCK EISKDSYHRL GQATCDRSSD QSNRASKKRK ELHSEEEDEG
201: EDNDDASAAS KKPRVVWSAE LHRKFVAAVN QLGIDKAVPK RILELMNVEK LTRENVASHL QKYRLYLRRL SAVASQQASI AAAFGGRDPF EGLHSYHQPF
301: APSLNPHGLL SGAGAATFEL QDFVPSKAIQ CASSIGAVSH CAGDTNKFNI VSLQDNQQAD LTQGLTTSSL GQPRLQQTWI HQETNDLCSV FSGGAQANTM
401: SGTFQRITSS SLAPEDLLEC TPHIKLGAHP SIGISQQGAL PISDGFSVDK LPLHIPFDGA DTGFLAREPK MDQKGIFSER MNVRVCPSES LIAANNAKCG
501: ASSSGSTMLL PPDTERHSEY LQFGAASNSR HRMDGVREDQ CLNNADFSYD GGAIVPEQTH MDDLGIPKLQ GGFNSSSCNF DGLLNSIIQV ENPHVMTILP
601: L
001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
Arabidopsis Description
ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.