Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29751 | Soybean | nucleus | 93.46 | 88.54 |
| VIT_06s0004g05120.t01 | Wine grape | nucleus | 66.01 | 64.95 |
| GSMUA_Achr5P07060_001 | Banana | nucleus | 45.42 | 60.7 |
| Solyc06g005680.2.1 | Tomato | nucleus | 52.29 | 60.15 |
| PGSC0003DMT400005490 | Potato | nucleus | 57.84 | 58.61 |
| Zm00001d011785_P001 | Maize | nucleus | 39.87 | 55.71 |
| Os01t0971800-00 | Rice | nucleus | 42.81 | 55.04 |
| GSMUA_Achr10P... | Banana | nucleus | 48.37 | 53.05 |
| CDX99104 | Canola | nucleus | 50.0 | 52.76 |
| KRH76596 | Soybean | mitochondrion | 20.59 | 52.07 |
| Zm00001d041960_P001 | Maize | nucleus | 43.46 | 51.55 |
| CDX82988 | Canola | nucleus | 43.46 | 51.35 |
| CDX68392 | Canola | nucleus | 43.79 | 51.15 |
| Bra018204.1-P | Field mustard | nucleus | 50.65 | 50.99 |
| CDY61256 | Canola | nucleus | 45.42 | 50.73 |
| Bra033809.1-P | Field mustard | nucleus | 46.73 | 50.18 |
| PGSC0003DMT400077979 | Potato | nucleus | 50.65 | 49.36 |
| AT5G59570.2 | Thale cress | nucleus | 47.39 | 48.66 |
| HORVU3Hr1G114970.1 | Barley | nucleus | 43.14 | 48.18 |
| AT3G46640.3 | Thale cress | nucleus | 50.98 | 48.15 |
| Solyc06g076350.2.1 | Tomato | nucleus | 50.33 | 47.83 |
| TraesCS3A01G526600.1 | Wheat | nucleus | 43.46 | 46.67 |
| TraesCS3D01G531900.1 | Wheat | nucleus | 42.81 | 46.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.08 | 46.23 |
| TraesCS3B01G594300.1 | Wheat | nucleus | 42.81 | 45.64 |
| KRH71692 | Soybean | nucleus | 32.35 | 38.08 |
| KRG95053 | Soybean | nucleus | 36.93 | 36.22 |
| KRH66705 | Soybean | nucleus | 36.93 | 35.09 |
| KRH16193 | Soybean | nucleus | 15.69 | 23.76 |
| KRH60428 | Soybean | nucleus | 15.69 | 19.51 |
| KRH33116 | Soybean | cytosol | 16.67 | 17.89 |
| KRH25649 | Soybean | cytosol | 11.76 | 15.86 |
| KRH60425 | Soybean | nucleus | 15.36 | 13.06 |
| KRG97483 | Soybean | nucleus | 18.63 | 12.53 |
| KRG93902 | Soybean | nucleus | 15.69 | 12.47 |
| KRG93917 | Soybean | cytosol | 14.38 | 12.02 |
| KRH02311 | Soybean | nucleus | 25.82 | 11.67 |
| KRH50777 | Soybean | nucleus | 25.49 | 11.49 |
| KRH37916 | Soybean | nucleus | 24.84 | 10.89 |
| KRH61694 | Soybean | nucleus | 23.2 | 10.82 |
| KRH42619 | Soybean | nucleus | 17.97 | 10.78 |
| KRH41727 | Soybean | nucleus | 17.32 | 10.77 |
| KRH12938 | Soybean | nucleus | 24.51 | 10.7 |
| KRH12005 | Soybean | nucleus | 23.2 | 10.57 |
| KRH58247 | Soybean | cytosol | 10.46 | 10.56 |
| KRH05273 | Soybean | nucleus | 22.88 | 10.49 |
| KRH70359 | Soybean | nucleus | 21.57 | 10.43 |
| KRH15779 | Soybean | nucleus | 22.88 | 10.42 |
| KRH37035 | Soybean | nucleus | 22.88 | 10.4 |
| KRH49669 | Soybean | nucleus | 21.24 | 10.27 |
| KRH41726 | Soybean | nucleus | 13.4 | 10.22 |
| KRH52361 | Soybean | nucleus | 23.2 | 10.2 |
| KRH20086 | Soybean | nucleus | 21.57 | 9.71 |
| KRH03086 | Soybean | nucleus | 21.57 | 9.69 |
| KRH38615 | Soybean | nucleus | 16.67 | 9.66 |
| KRH31403 | Soybean | nucleus | 18.3 | 9.27 |
| KRH58726 | Soybean | endoplasmic reticulum, extracellular | 18.95 | 9.13 |
| KRH09142 | Soybean | nucleus | 18.95 | 8.67 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100816634 | MapMan:27.1.6.3.1 | EMBL:ACUP02007184 | EnsemblPlantsGene:GLYMA_12G060200 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7LTA3 |
| ProteinID:KRH24746.1 | ProteinID:KRH24747.1 | EnsemblPlants:KRH24748 | ProteinID:KRH24748 | ProteinID:KRH24748.1 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31442 | PANTHER:PTHR31442:SF12 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0001BA8B14 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr12:-:4345126..4348039
Molecular Weight (calculated)
33787.6 Da
IEP (calculated)
6.260
GRAVY (calculated)
-0.750
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEVKTSEY DEERVMEWEM GLPTANDLTP LSQPLIPPEL ASAFSISPEP HRTLLEVNRA SRNTLSTIRG GGSVHQAFSS NNNNNHHYDG DGDGGDEEEY
101: DDADRDGSGS DSRKQRKIDC GVAEEADSAV RTETSAERTA VKRPRLVWTP QLHKRFVDVV AHLGIKNAVP KTIMQLMNVE GLTRENVASH LQKYRLYLKR
201: MQGLSNEGPS SSDQLFASTA VPQSLHDSAP PSAHSNGHGH LPVPMMSMPY PPPMMSMPYP PPMMSGMPHA HGHMGIPMPN SSATSAYHPY NMLHQRDWPH
301: LAPNDK
101: DDADRDGSGS DSRKQRKIDC GVAEEADSAV RTETSAERTA VKRPRLVWTP QLHKRFVDVV AHLGIKNAVP KTIMQLMNVE GLTRENVASH LQKYRLYLKR
201: MQGLSNEGPS SSDQLFASTA VPQSLHDSAP PSAHSNGHGH LPVPMMSMPY PPPMMSMPYP PPMMSGMPHA HGHMGIPMPN SSATSAYHPY NMLHQRDWPH
301: LAPNDK
001: MGEEVQMSDY DVSGDGDRVS EWEMGLPSDE DLASLSYSLI PPNLAMAFSI TPERSRTIQD VNRASETTLS SLRGGSSGPN TSSSNNNVEE EDRVGSSSPG
101: SDSKKQKTSN GDGDDGGGVD PDSAMAAEEG DSGTEDLSGK TLKRPRLVWT PQLHKRFVDV VAHLGIKNAV PKTIMQLMNV EGLTRENVAS HLQKYRLYLK
201: RMQGLTNEGP SASDKLFSST PVPPQSFQDI GGGGGSSGNV GVPIPGAYGT QQMMQMPVYA HHMGMQGYHH QNHNHDPYHQ NHRHHHGAGG NGAFESNPYM
301: MQQNKFGSMA SYPSVGGGSA NEN
101: SDSKKQKTSN GDGDDGGGVD PDSAMAAEEG DSGTEDLSGK TLKRPRLVWT PQLHKRFVDV VAHLGIKNAV PKTIMQLMNV EGLTRENVAS HLQKYRLYLK
201: RMQGLTNEGP SASDKLFSST PVPPQSFQDI GGGGGSSGNV GVPIPGAYGT QQMMQMPVYA HHMGMQGYHH QNHNHDPYHQ NHRHHHGAGG NGAFESNPYM
301: MQQNKFGSMA SYPSVGGGSA NEN
Arabidopsis Description
PCL1Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J959]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.