Factsheet for GSMUA_Achr10P12590_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P27500_001	Banana	nucleus	57.92	48.94
GSMUA_Achr11P...	Banana	nucleus	57.5	45.54
GSMUA_Achr8P05880_001	Banana	nucleus	59.58	45.4
GSMUA_Achr2P01920_001	Banana	nucleus, plastid	52.08	43.1
GSMUA_Achr5P07060_001	Banana	nucleus	33.33	34.93
GSMUA_Achr10P...	Banana	nucleus	33.75	29.03
GSMUA_AchrUn_...	Banana	nucleus	33.33	26.23
GSMUA_Achr3P14630_001	Banana	cytosol	19.17	12.6
GSMUA_AchrUn_...	Banana	nucleus	13.33	12.03
GSMUA_Achr10P...	Banana	nucleus	20.0	11.06
GSMUA_Achr8P32070_001	Banana	nucleus	20.83	9.17
GSMUA_Achr11P...	Banana	nucleus	25.0	9.1
GSMUA_Achr3P13400_001	Banana	nucleus	23.75	9.08
GSMUA_Achr10P...	Banana	nucleus	23.75	8.73
GSMUA_Achr11P...	Banana	nucleus	22.08	8.39
GSMUA_Achr5P13050_001	Banana	cytosol	7.92	8.3
GSMUA_Achr2P05130_001	Banana	nucleus	22.08	8.23
GSMUA_Achr1P22230_001	Banana	nucleus	23.75	7.88
GSMUA_Achr8P30850_001	Banana	nucleus	23.33	7.78
GSMUA_Achr9P16610_001	Banana	nucleus	23.33	7.75
GSMUA_Achr5P16510_001	Banana	cytosol, nucleus, plastid	6.67	7.41

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G12590_001
EnsemblPlants:GSMUA_Achr10P12590_001	EnsemblPlants:GSMUA_Achr10T12590_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0RHN5	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31442	PANTHER:PTHR31442:SF1	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000296F681	SEG:seg	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G12590_001]

Coordinates

chr10:-:21582568..21583290

Molecular Weight (calculated)

25988.1 Da

IEP (calculated)

9.992

GRAVY (calculated)

-0.496

Length

240 amino acids

Sequence
(BLAST)

001: MPLSQALITP DLALAFGIPS SSSAPTTGAD PAPDDLLRGP HSSDLNGGRG EEEPARTLKR PRLVWTPQLH KRFVDAVAHL GINNAVPKTI MQLMGVDGLT
101: RENVASHLQK YRLYLKRMQM QGLNPSSPSS APQPFLGRMP VAALQHHQQN TAPVQLQQQH QYYHQTHLGH FPGSGPGFLT RNMQPPPVTH RTMGLVPGMG
201: SAPVPPHSTA AAYLNTSEWS GMGEGGARRK ELTLFPTGED

Best Arabidopsis Sequence Match ( AT5G05090.1 )
(BLAST)

001: MREEDSNWFA KWEEELPSPE ELIPLSQSLI TPDLAIAFDL HRNNNSNSGQ PLPQTTPPQP NSSAEIAGDS TGDEPARTLK RPRLVWTPQL HKRFVDAVAH
101: LGIKNAVPKT IMQLMSVDGL TRENVASHLQ KYRLYLKRMK SGGGGGGSGD SDHLFASSPV PPHFLHPTSR QSSDLFIPSF VPISTQQQHI AAPPSQFLHR
201: QISAVNFTSP TKATDQAMFL ARQQSELQQP VFKPSSLHLH SQVANYTQDL KSGAKTVLTL FPTRDD

Arabidopsis Description

At5g05090 [Source:UniProtKB/TrEMBL;Acc:Q9FF65]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.