Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 1
- mitochondrion 6
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G45210.1 | Os02t0708400-01 | AT3G27960.1 | 21798944 |
| AT3G45210.1 | Os02t0656300-01 | AT3G48150.1 | 21798944 |
| AT3G45210.1 | Os06t0679100-00 | AT3G48150.1 | 21798944 |
| AT5G03230.1 | Os01t0218200-00 | AT2G42580.1 | 19000166 |
| AT5G03230.1 | Os05t0210600-01 | AT2G42580.1 | 19000166 |
| AT5G03230.1 | Os05t0587300-01 | AT2G42580.1 | 19000166 |
| AT5G03230.1 | Os02t0182100-01 | AT4G31920.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G397000.1 | Wheat | mitochondrion | 79.89 | 78.09 |
| TraesCS2A01G380100.1 | Wheat | mitochondrion | 79.31 | 77.53 |
| TraesCS2D01G376300.1 | Wheat | mitochondrion | 77.59 | 76.27 |
| HORVU0Hr1G005210.2 | Barley | cytosol, plastid | 75.29 | 74.01 |
| Zm00001d003009_P001 | Maize | mitochondrion, nucleus | 73.56 | 69.57 |
| KXG26730 | Sorghum | mitochondrion | 73.56 | 67.02 |
| Zm00001d025872_P001 | Maize | mitochondrion | 63.22 | 61.11 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 53.45 | 56.71 |
| Os02t0629000-01 | Rice | mitochondrion | 55.17 | 56.47 |
| Solyc06g075170.1.1 | Tomato | nucleus | 41.38 | 44.17 |
| KRH22888 | Soybean | cytosol, mitochondrion, nucleus | 39.08 | 44.16 |
| PGSC0003DMT400045373 | Potato | cytosol | 36.78 | 43.54 |
| PGSC0003DMT400062500 | Potato | nucleus | 40.8 | 41.52 |
| VIT_08s0040g01860.t01 | Wine grape | cytosol | 39.08 | 41.46 |
| VIT_06s0004g02830.t01 | Wine grape | cytosol | 39.66 | 41.32 |
| PGSC0003DMT400020798 | Potato | plastid | 39.66 | 40.59 |
| Solyc11g069450.1.1 | Tomato | cytosol | 40.23 | 40.46 |
| KRH26408 | Soybean | cytosol | 33.91 | 39.6 |
| Solyc09g007790.1.1 | Tomato | cytosol | 35.63 | 39.24 |
| PGSC0003DMT400055482 | Potato | cytosol | 35.63 | 38.75 |
| Solyc10g086110.1.1 | Tomato | cytosol | 35.06 | 38.61 |
| AT3G45210.1 | Thale cress | nucleus | 32.76 | 38.51 |
| CDY65979 | Canola | nucleus | 35.06 | 38.36 |
| AT5G60680.1 | Thale cress | nucleus | 35.63 | 38.04 |
| KRH29916 | Soybean | mitochondrion | 37.36 | 38.01 |
| AT5G03230.1 | Thale cress | nucleus | 36.21 | 37.95 |
| Bra002459.1-P | Field mustard | nucleus | 34.48 | 37.5 |
| Bra020237.1-P | Field mustard | nucleus | 35.63 | 37.35 |
| KRH25013 | Soybean | mitochondrion | 36.21 | 37.06 |
| AT2G28400.1 | Thale cress | mitochondrion | 33.91 | 36.42 |
| CDY62461 | Canola | nucleus | 32.76 | 36.08 |
| CDX70321 | Canola | nucleus | 35.06 | 34.66 |
| CDY10396 | Canola | nucleus | 35.06 | 34.66 |
| CDX77180 | Canola | nucleus | 32.76 | 34.55 |
| KRH19865 | Soybean | mitochondrion | 35.63 | 34.44 |
| KRG95986 | Soybean | nucleus | 29.89 | 34.21 |
| Bra009543.1-P | Field mustard | nucleus | 34.48 | 34.09 |
| Bra005738.1-P | Field mustard | cytosol | 34.48 | 33.71 |
| CDX80857 | Canola | cytosol | 34.48 | 33.52 |
| CDY11244 | Canola | cytosol | 33.91 | 33.15 |
| KRH67690 | Soybean | cytosol | 31.61 | 33.13 |
| KRH32477 | Soybean | cytosol | 35.63 | 32.98 |
| Os11t0154300-01 | Rice | cytosol, mitochondrion, plastid | 27.01 | 27.49 |
| Os03t0113900-02 | Rice | cytosol, mitochondrion, plastid | 30.46 | 26.9 |
| Os04t0542000-01 | Rice | cytosol, nucleus, plastid | 31.61 | 26.32 |
| Os01t0862600-01 | Rice | nucleus | 31.03 | 24.66 |
| Os07t0516300-01 | Rice | mitochondrion | 27.01 | 23.98 |
| Bra035703.1-P | Field mustard | cytosol | 30.46 | 21.54 |
| Os04t0413900-01 | Rice | nucleus | 29.31 | 20.82 |
| Os10t0481000-00 | Rice | mitochondrion | 25.29 | 14.72 |
| Os12t0156000-00 | Rice | nucleus | 21.26 | 13.12 |
Protein Annotations
| EMBL:AK065832 | EMBL:KX434734 | EnsemblPlants:Os04t0520700-01 | EnsemblPlantsGene:Os04g0520700 | EntrezGene:4336422 | InterPro:Senescence_reg_S40 |
| PANTHER:PTHR33083 | PANTHER:PTHR33083:SF40 | PFAM:PF04520 | ProteinID:BAF15247.1 | ProteinID:BAS90119.1 | ProteinID:CAD41447.1 |
| ProteinID:EAZ13689.1 | RefSeq:XP_015634155.1 | SEG:seg | UniParc:UPI00001B18F5 | UniProt:Q7XUA4 | MapMan:35.2 |
Description
Protein of unknown function DUF584 family protein. (Os04t0520700-01)
Coordinates
chr4:-:26074703..26075861
Molecular Weight (calculated)
18357.3 Da
IEP (calculated)
6.961
GRAVY (calculated)
-0.497
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSARSAAA KHAYRMFAPS RGAAARCPGS PGADEFDESD VWGSYGAAGV ESSPAELGAR GRAIPSARAG RKAPLDRAAG SLPVNIPDWQ KILGVEYRDH
101: QAAAAEWELQ GDGDDDYEYG KVAGVGGVVI PPHELAWRGR AASLSVHEGI GRTLKGRDLS RVRDAVWKKT GFED
101: QAAAAEWELQ GDGDDDYEYG KVAGVGGVVI PPHELAWRGR AASLSVHEGI GRTLKGRDLS RVRDAVWKKT GFED
001: MATSKCYYPR PSHRFFTTDQ HVTATSDFEL DEWDLFNTGS DSSSSFSFSD LTITSGRTGT NRQIHGGSDS GKAASSLPVN VPDWSKILGD ESRRQRKISN
101: EEEVDGDEIL CGEGTRRVPP HELLANRRMA SFSVHEGAGR TLKGRDLSRV RNTIFKIRGI ED
101: EEEVDGDEIL CGEGTRRVPP HELLANRRMA SFSVHEGAGR TLKGRDLSRV RNTIFKIRGI ED
Arabidopsis Description
Uncharacterized protein At2g28400 [Source:UniProtKB/TrEMBL;Acc:Q9SKN0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.