Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62461 | Canola | nucleus | 81.48 | 83.54 |
| CDX77180 | Canola | nucleus | 83.95 | 82.42 |
| Bra035703.1-P | Field mustard | cytosol | 74.07 | 48.78 |
| KRH22888 | Soybean | cytosol, mitochondrion, nucleus | 40.12 | 42.21 |
| KRH26408 | Soybean | cytosol | 38.27 | 41.61 |
| AT5G60680.1 | Thale cress | nucleus | 39.51 | 39.26 |
| PGSC0003DMT400020798 | Potato | plastid | 40.74 | 38.82 |
| AT3G45210.1 | Thale cress | nucleus | 35.19 | 38.51 |
| Solyc11g069450.1.1 | Tomato | cytosol | 40.74 | 38.15 |
| Solyc06g075170.1.1 | Tomato | nucleus | 37.65 | 37.42 |
| GSMUA_Achr11P... | Banana | mitochondrion | 31.48 | 35.66 |
| PGSC0003DMT400062500 | Potato | nucleus | 37.04 | 35.09 |
| Os04t0520700-01 | Rice | mitochondrion | 36.42 | 33.91 |
| TraesCS1D01G155400.1 | Wheat | mitochondrion | 37.65 | 33.7 |
| TraesCS1B01G174100.1 | Wheat | mitochondrion | 37.65 | 33.7 |
| HORVU1Hr1G041890.1 | Barley | mitochondrion | 37.04 | 33.52 |
| Zm00001d014007_P001 | Maize | cytosol, plastid | 37.04 | 33.52 |
| TraesCS1A01G157900.1 | Wheat | mitochondrion | 37.04 | 33.15 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 33.33 | 32.93 |
| Zm00001d025872_P001 | Maize | mitochondrion | 36.42 | 32.78 |
| GSMUA_Achr8P18920_001 | Banana | cytosol, mitochondrion | 32.1 | 32.1 |
| EER91475 | Sorghum | mitochondrion | 36.42 | 31.05 |
| TraesCS2D01G376300.1 | Wheat | mitochondrion | 33.33 | 30.51 |
| TraesCS2B01G397000.1 | Wheat | mitochondrion | 33.33 | 30.34 |
| TraesCS2A01G380100.1 | Wheat | mitochondrion | 33.33 | 30.34 |
| Os02t0629000-01 | Rice | mitochondrion | 31.48 | 30.0 |
| Zm00001d003009_P001 | Maize | mitochondrion, nucleus | 33.95 | 29.89 |
| AT4G04630.1 | Thale cress | cytosol, mitochondrion, nucleus | 30.86 | 29.76 |
| HORVU0Hr1G005210.2 | Barley | cytosol, plastid | 32.1 | 29.38 |
| HORVU0Hr1G016350.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 32.1 | 29.21 |
| TraesCS6D01G212800.1 | Wheat | cytosol | 30.86 | 28.9 |
| KXG26730 | Sorghum | mitochondrion | 33.95 | 28.8 |
| AT5G03230.1 | Thale cress | nucleus | 29.01 | 28.31 |
| Zm00001d017287_P001 | Maize | cytosol | 29.63 | 28.24 |
| TraesCS6A01G222200.1 | Wheat | cytosol | 30.25 | 27.84 |
| AT4G26950.1 | Thale cress | nucleus | 24.69 | 27.78 |
| TraesCS6B01G258900.1 | Wheat | nucleus | 29.63 | 27.75 |
| AT4G21970.1 | Thale cress | nucleus | 26.54 | 27.39 |
| AT4G21930.1 | Thale cress | cytosol | 27.78 | 24.59 |
| AT1G11700.1 | Thale cress | nucleus | 29.01 | 23.38 |
| AT1G61930.1 | Thale cress | cytosol | 29.01 | 23.15 |
| AT3G15040.1 | Thale cress | nucleus | 30.25 | 20.16 |
| Os10t0481000-00 | Rice | mitochondrion | 26.54 | 14.38 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817388 | ProteinID:AAD20686.1 | ProteinID:AEC08116.1 | ArrayExpress:AT2G28400 | EnsemblPlantsGene:AT2G28400 |
| RefSeq:AT2G28400 | TAIR:AT2G28400 | RefSeq:AT2G28400-TAIR-G | EnsemblPlants:AT2G28400.1 | TAIR:AT2G28400.1 | EMBL:AY070388 |
| EMBL:AY122954 | RefSeq:NP_180407.1 | PFAM:PF04520 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF9 | UniProt:Q9SKN0 | InterPro:Senescence_reg_S40 | UniParc:UPI00000A8D56 |
| SEG:seg | : | : | : | : | : |
Description
Uncharacterized protein At2g28400 [Source:UniProtKB/TrEMBL;Acc:Q9SKN0]
Coordinates
chr2:-:12147883..12149072
Molecular Weight (calculated)
18055.8 Da
IEP (calculated)
6.679
GRAVY (calculated)
-0.773
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSKCYYPR PSHRFFTTDQ HVTATSDFEL DEWDLFNTGS DSSSSFSFSD LTITSGRTGT NRQIHGGSDS GKAASSLPVN VPDWSKILGD ESRRQRKISN
101: EEEVDGDEIL CGEGTRRVPP HELLANRRMA SFSVHEGAGR TLKGRDLSRV RNTIFKIRGI ED
101: EEEVDGDEIL CGEGTRRVPP HELLANRRMA SFSVHEGAGR TLKGRDLSRV RNTIFKIRGI ED
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.